Cucurbita maxima (winter squash): 111471237
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Entry
111471237 CDS
T05246
Name
(RefSeq) probable pectate lyase 12
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax00040
Pentose and glucuronate interconversions
cmax01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111471237
Enzymes [BR:
cmax01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
111471237
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
111471237
NCBI-ProteinID:
XP_022972721
UniProt:
A0A6J1I6R7
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All DBs
Position
Unknown
AA seq
472 aa
AA seq
DB search
MVAAICIVLLALLLHSLSPPCTALNLTLPGQHPSPELVAQEVHRKVNDSMTRRQLIQNSE
NDESSSCYTGNPIDDCWKCDSNWPNNRQRLADCAIGFGQYALGGKNGEFYVVTDDSDDDP
VNPEPGTLRYAVIQPQPLWIVFPANMLIKLSQELIFNSYKTLDGRGANVHIVGGGCITLQ
YISNIIIHNIHIHHCYPSGNTMVRSSPTHYGYRTKSDGDGISIFGSKDIWIDHCSLSHCK
DGLIDAVMGSTGITISNNYFSHHDEVMLLGHSDSYSPDSGMQVTIAFNHFGEKLVQRMPR
CRRGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPYDRNAKEVTKRVETAESEWRG
WNWRSDGDILVNGAFFITSGQGLEVKYEKAYSVEPKSAALIDQLTWHAGPLGVGSRDNNL
GMWTTGSNGGGGYVLGSGPDYTDDMSESLWRIRFRYFVMVFSFCALALAFVP
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggtggctgcaatctgtattgtgctgctagctttgctgctacactccctctcgccgcca
tgcaccgctctcaacctcaccctccccggccagcatccgagccctgaactggttgctcaa
gaagttcacaggaaagtgaatgattccatgacaagaaggcaactgatccaaaactcagag
aacgacgaatcttcttcctgctacaccggaaaccccatcgacgactgctggaaatgcgat
tcaaattggccaaacaaccgccaacgcctcgccgattgcgccataggatttggccagtac
gctttaggagggaagaacggtgagttctacgtcgtcacagatgattccgacgatgatcca
gtcaatccagagcccgggacattacgatacgccgttatacagccacagcctctctggatc
gtcttccccgccaatatgctcatcaaactctcacaggaactcatcttcaacagctacaaa
accctagacggccgcggcgccaacgtccacatcgtcggcggcggttgcatcaccttgcaa
tacataagtaacatcatcatccacaatatccacatccaccattgttatccatcagggaac
accatggtccgatcaagtccgacgcattacggataccgtacgaaatcggacggcgacggg
atctcgatcttcgggtctaaggacatatggattgaccattgttcactctcgcattgcaag
gatgggctgattgatgcggtgatgggctccaccggaatcacgatttcaaacaattatttc
tcgcatcacgatgaggttatgttactaggtcacagtgacagctactcgccggactccgga
atgcaggtaacaatagcattcaaccacttcggcgagaagcttgtgcaaaggatgccacgg
tgccggcgaggctacatccacgtggtcaacaacgacttcacccaatgggaaatgtacgca
atcggaggcagcgggaaccccacaatcaacagccaaggcaaccgctacaccgccccatac
gaccgcaacgccaaggaggtaaccaagcgtgtagagaccgccgagtccgagtggcgcggc
tggaactggcgctctgacggcgacatcctcgtcaacggcgccttcttcatcacttccggc
caaggcctcgaagtcaagtacgagaaggcttacagcgtcgagcccaagtccgccgcccta
atcgaccagctcacttggcacgccggtccactcggcgtcggcagtagggacaacaatttg
ggcatgtggaccactggctctaatggtggtggtggctatgttcttgggtctggcccggat
tacactgacgacatgtcggaaagcctctggcggattcggtttcgatattttgttatggta
ttttctttctgtgcattggcacttgcctttgtgccatga
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