Cucurbita maxima (winter squash): 111471389
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Entry
111471389 CDS
T05246
Name
(RefSeq) DNA mismatch repair protein MLH1 isoform X1
KO
K08734
DNA mismatch repair protein MLH1
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03430
Mismatch repair
cmax03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
111471389
03460 Fanconi anemia pathway
111471389
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmax03400
]
111471389
DNA repair and recombination proteins [BR:
cmax03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
111471389
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
111471389
NCBI-ProteinID:
XP_022972873
UniProt:
A0A6J1IBD7
LinkDB
All DBs
Position
Unknown
AA seq
739 aa
AA seq
DB search
MEPHADDEIIPMETAGEEEVPREEPPKILRLDNSVVNRIAAGEVIQRPVSAIKELVENSL
DAQSTSVNVVVKDGGLKLIQVSDDGHGIRYEDLPILCERHTTSKLSKFEDLQSIRSMGFR
GEALASMTYVGHVTVTTITKGQLHGYRVSYRDGVMEHEPKPCAAVKGTQITVENLFYNMS
ARRKTLQNVSDDYTKIVDLLSRFAIHHINISFSCRKHGAARADVHSVGSTSRLDAIRTVY
GASVARNLMKIEVSENDKACSDFKMDGLISNSNYIAKKITMVLFINERMVDCSALKRAIE
IVYAATLPKASKPFIYMSIILPPEHVDVNVHPTKKEVSLLNQEVIIERIQSAVESKLRSS
NDTRTFQEQDVESSAASQMVISSDYTQNSSQSGTEGSKSQKIPVQKMVRTDSTDPAGRLH
AYVQMKPPGLPESSLNTVRSFVRMRRNPKEAANLTSVQDLVAEIDQNCHAGLLNTVRHCV
YIGMADDVFALLQHDTHLYLADVVSLSKELMYQQVLCRFAHFNAIQLSNPAPLYELISLA
LREEDVNSESNENDDFNKKVAETSTKLLKLKAEMLEEFFCIHIDINGNLARLPVVLDQYT
PDMDRVPEFVLSLANDIDWEDEKNCIQSISAAIGNFYAMHPPLLPNPSGDGLQFYKRIKS
SGNPEDENIGDDTMTMENEIDHGLLSEAETIWAQREWSIQHVLIPSMKLFFKPPHSLAEN
GSFIRVASLEKLYKIFERC
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggaaccccacgcggatgacgagattattcccatggagacggctggggaagaagaagtt
cctcgtgaagaacctcccaaaatcctccgactcgacaactccgtcgtcaatcgtatcgct
gccggagaggtcattcaaaggccagtgtccgccattaaagaactcgtcgaaaacagcctc
gacgcccaatctacctccgttaacgtcgttgtcaaagacggtggtctcaaactcatccaa
gtttctgacgacggccacggcatccgttatgaagatttgccgattttgtgcgagaggcac
acgacgtccaagctgtcaaaatttgaggatttacagtccataaggtcgatgggattccga
ggagaggcgctggcgagcatgacctatgtaggtcatgttacggtcaccaccattactaaa
ggacaacttcacggttacagagtatcctatagagatggagtgatggagcatgagcctaag
ccatgtgctgctgtaaaaggaactcaaataacggttgagaatctgttctataacatgagt
gctaggaggaagacactacaaaatgtgtctgatgattacacaaagattgtggatctccta
agtcgatttgccattcatcatataaacatcagcttttcttgcagaaagcatggagctgct
agagcagacgttcactcagttgggtcaacttcaaggttggatgccattcgtacagtttac
ggtgcatcagttgctcgcaatctaatgaaaatagaagtttcagaaaatgacaaagcctgt
tcagatttcaaaatggatggtctaatctcgaactcgaattatattgcgaagaagatcaca
atggtgctctttattaatgaaagaatggtagactgtagtgctttaaaaagagctattgaa
attgtttatgctgcaaccttgcccaaagcatccaaacctttcatatatatgtcaattata
ttgccacctgagcatgttgatgtgaatgttcatccaaccaaaaaagaggtaagcctcctg
aaccaggaagttattattgagaggatacagtcagctgtggaatcaaaattgagaagttct
aatgacacgaggacatttcaagaacaggatgtagaatcttctgcggctagtcaaatggtt
attagcagtgactatactcagaattcctcgcagtctggtacagaaggttcaaagtcacag
aagattccagtgcaaaaaatggttaggacagattcaacagatccagctggaaggttgcac
gcatatgtgcaaatgaagcctcctggcctccctgaatctagcttgaatactgtgaggtct
tttgttagaatgcgaaggaatccaaaggaagctgctaatcttactagcgttcaagatctt
gttgcagaaattgatcagaattgtcatgctggtctccttaacactgtaagacattgtgta
tatattggaatggcagatgacgtcttcgctttgcttcagcatgatactcatctttatcta
gcagatgttgtgagcttgagcaaagaactcatgtatcagcaagtgttatgtcgatttgca
cattttaatgcaatacaattgagcaacccggcccctctgtacgagttaattagtttggca
ctgagggaggaagatgtgaattcagagtctaatgagaatgatgattttaataagaaggta
gctgagacgagtacaaaactgctcaagttgaaagctgaaatgctcgaggaatttttctgc
atacatattgacataaatggaaatttggctagactaccagtcgtacttgaccaatacaca
cctgatatggaccgtgttcctgaatttgtactttctttggctaatgatattgattgggaa
gatgagaaaaattgtatccagtcgatttcagctgccattgggaacttctatgccatgcat
cctcccttgctgccaaatccatcgggtgatggcttgcagttctacaaaaggataaaatca
tccggtaatcctgaagatgaaaatataggtgatgatacgatgacaatggagaatgaaatc
gaccacggtctactatcggaggcagaaaccatatgggctcaacgtgaatggtcaatacag
catgtactcatcccatcaatgaaacttttcttcaagcctccacattctctcgctgaaaat
ggatctttcattcgggttgcatcattagagaaactttacaagatctttgagagatgttga
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