Cucurbita maxima (winter squash): 111471538
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Entry
111471538 CDS
T05246
Name
(RefSeq) uncharacterized protein LOC111471538 isoform X1
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
cmax
Cucurbita maxima (winter squash)
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmax03019
]
111471538
Messenger RNA biogenesis [BR:
cmax03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
111471538
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DPBB_CI111
Motif
Other DBs
NCBI-GeneID:
111471538
NCBI-ProteinID:
XP_022973021
UniProt:
A0A6J1I7J4
LinkDB
All DBs
Position
Unknown
AA seq
1220 aa
AA seq
DB search
MPRGSRHKSSRQGLKDAKESSDSENDSTLRDRKGKESGSRVMKDSASSEKRRFESKDSKE
FYGSENLEMEEHGHSKRRKERYDEGTTDRWNGGSDDELGVPSKKSKTLVDSKSKRRDESV
GFHGDGEEHKKSSGKGEGRHRESSRKEGRNGGGEREREREREREREKDRKGREGRSDRGV
ASEDLRVEKQVEKNSENVLHSPGLENHLEIRVRKRTGSFDGDKHKDDIGDVDNRQLSSKN
DTVKDGRRKSEKYKDERNREKYREDVDRDGKERHEQLVKDHISRSNDRDLRDEKDAMDMH
HKRNKPQDSDPDREVTKAKREGDIDAMRDQDHDRHHAYERDHEQESRRRRDRGRDRDRDR
DRDSRRHRSRSRARDRYSDYECDVDRDGYHFDDQYTKYVDSRGRKRSPNDHDDSVDARSK
SLKNSHHANDEKKSLSNDKVDSDAERGRSQSRSRHGDVSLSSHRRKSSPSSHSRVVTDEY
RHQDQEDLRDRYPKKEDRSKSISTRDKGVLSVVQEKGSKYTYSEKPSEIEGGNATEMLRD
RTLNSKNVDIEESGRRHNNSIDAKDLSSNKDRHSWDIQGEKPVMDDSSQVESYYSKGSQS
NPSPFHPRPAFRGGVDIPFDGSLDDDGRLNSNSHFRRGNDPNMGRVHGNTWRGVPNWTAP
LPNGFIPFQHGPPPHGSFQSLMPQFPAPPMFGIRPPLDINHSGIHYRMPDADRFSSHMHP
LGWQNMLDGSSPSHLHGWDANNGIFRDESHIYNGAEWDENRQMVNGRGWDSKAEMWKRQS
GSLKREIPSQFQKDERLVQDPVDDVSSKEICDENADTVLTKTAEIRPNIPSAKESPNTPE
LLSETPAPLSRSMDDNSKLSCSYLSKLKISTELALPDLYQQCQRLMDIEHCATADEETAA
YIVLEGGMRAVSVSSNSAQISLFRPNKNSVFQHAMDLYKKQRTEMKEMQAISREMPFSER
MLVEEQGMQVVSGGMAFSERKHEEKGFNFNNEEVKAPVSTVDAEMTQAPIKTTGVDKAIE
ADAALGKLEDLAVEADAALGELEDLAVEADSALGELEDLASPATREVKCLENSEESVPTT
NSTEVVMMDSEQQANLDAEKDTIVIANDNTPVNNINESSNDDDMKGIVNGKDSPRCDELS
NNNDIKGIVNGKESPGCGVGNSCFDKAVSGPLSFAGGDEIGGESCEEGGLMGGGGGGGGV
PIGSESLILSQIRHSPESTH
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atgccgaggggttcgaggcacaaatctagtagacaggggttgaaggatgctaaggaatct
tcggactcggaaaatgattccactctgagagatcggaagggcaaagagagtgggagtagg
gtaatgaaggactctgcttctagtgagaagcgcagattcgaatcgaaggattcaaaagag
ttctacggttcagagaatctggagatggaagagcatggacattcgaagcggcgtaaggag
aggtatgatgagggaacgactgataggtggaatgggggaagcgacgatgagcttggtgtt
ccttccaaaaagtcaaaaacgttggtggattcgaagagcaagagaagggacgagagtgtg
ggatttcacggggatggcgaagaacacaagaagagtagtggaaagggcgagggaaggcac
cgggagtcaagccgaaaggagggtaggaatggtggaggggaaagggaaagggaaagggag
agggagagggagagggagaaggataggaaaggtagagaaggaagaagtgacaggggggtt
gcaagtgaagatctccgtgttgaaaaacaagtggaaaagaactcagagaatgtgttgcat
agccctggattagagaatcacctggagatccgagttaggaagagaactggttcttttgat
ggggataaacataaagatgatataggggatgtcgataatagacagctatcttcaaagaat
gatactgtgaaggatggaagacgaaagagtgagaaatacaaggatgagagaaatagggag
aagtaccgggaagatgttgatagggatggcaaggaaagacatgaacaacttgttaaagat
cacattagcaggtcaaatgacagagatttgagagatgagaaggatgcaatggatatgcat
cataagagaaataagcctcaagatagcgatcctgatcgagaggtaaccaaggccaaacgt
gaaggtgatatagatgctatgagagatcaagatcatgatcgccaccatgcatatgaacgt
gatcatgaacaagagagtaggcgtagacgtgatcgtggtcgggatcgtgaccgtgaccgt
gatcgggatagtagacgacatcgtagtcgaagccgtgctcgtgaccgttactctgattat
gaatgtgatgttgatcgagatggatatcattttgatgatcaatacacaaaatatgttgat
agtaggggaaggaaaagatctcctaatgatcatgatgattctgttgatgctagatctaaa
agtttgaagaatagtcaccatgcaaatgatgaaaagaagtctttgagcaatgataaagtg
gactcagatgctgagagaggaagatctcaatcacgatcccgtcatggagatgttagttta
agtagccatagacggaagagttcacccagttctcattcacgtgttgtcacagatgaatac
aggcatcaagatcaggaagatttgagagaccgatacccaaaaaaggaagataggtccaaa
tccatttctactagagataaaggtgttctttcagtagtacaggaaaagggttccaaatac
acttattcggagaaacccagtgaaatagagggtggcaatgctactgagatgttacgagac
aggactttaaattctaagaatgttgacattgaagaaagtggacgaaggcacaataattct
attgatgccaaagacctctcttccaataaggataggcatagctgggatatacaaggagag
aaacctgtgatggatgattcatctcaggtagagtcttattatagcaaaggtagtcagagc
aatccatcaccattccatcctcgccctgcttttaggggtggagttgatattccttttgat
ggttcactagatgatgatggcagacttaattctaatagccattttcgaaggggtaatgat
ccaaatatgggtagagtacatggcaacacttggagaggtgttccaaactggacagcacca
ctaccaaatggctttatccctttccagcatggacctcctcctcatggaagtttccaatca
cttatgccacagtttccagcaccacctatgtttggtatcagacccccgcttgatatcaat
cactcgggaattcattatcggatgcctgatgctgacagattttcaagtcacatgcatcca
ctagggtggcagaatatgttggatggttcaagcccttctcacttgcatggatgggatgca
aacaacggtatctttagggatgaatctcatatttataatggagctgaatgggatgagaac
aggcagatggtgaatggtcgaggttgggactccaaagctgaaatgtggaagagacagagt
ggctccctgaaaagggaaataccttcccaatttcagaaagatgagcgtttggtgcaagat
cctgttgatgatgtatcaagtaaagagatatgtgatgagaatgctgataccgttttaaca
aaaactgctgaaataaggcctaatatcccttctgcaaaagaaagccccaacacccccgaa
cttttatctgaaacaccagctcctcttagtcggtcaatggatgataattctaaacttagt
tgttcttacctttctaagcttaagatttccacagaacttgcacttcctgatttgtaccaa
cagtgtcagagattgatggacattgagcactgtgcaactgcagatgaggaaactgctgct
tatatagttcttgagggtggtatgagagctgtgtccgtctcttcaaatagtgcacaaata
tctcttttccgtccaaacaagaactcagtttttcagcatgcaatggacttgtataaaaag
cagagaacggaaatgaaggagatgcaagctatttctagggaaatgcccttctctgagagg
atgcttgtagaagagcaggggatgcaagttgtttccgggggaatggctttctcggagagg
aaacatgaagagaagggctttaatttcaataatgaagaagttaaggctcctgtttcaact
gttgatgcggaaatgacacaggcacccatcaaaaccactggtgttgataaggcaattgag
gcagatgctgctttgggtaaattggaggatttggcagttgaggcggatgctgctttgggg
gaactggaggatttggcagttgaggcggattctgctttgggggaactggaggatttggct
tcacctgccactcgggaggttaagtgtcttgagaactcagaggagtcggtgccgactacc
aattcaacagaagtggttatgatggattcagagcagcaggcgaacctagacgctgagaag
gataccattgtcatagcaaatgacaacacaccagttaataacatcaatgaatccagtaac
gacgacgacatgaaggggattgtcaatggcaaagactctccacgatgcgatgaattgagt
aacaacaacgacatcaaggggattgtgaatggcaaagaatctccaggatgtggagttggt
aattcttgttttgacaaagcagtgagtggtcctttatcttttgcaggaggagatgaaata
gggggggagagttgtgaggagggggggttaatgggtggtggtggtggtggtggtggtgtg
ccaatagggtcagagtctttaattttgagtcagatacgtcattctcctgaaagtacacat
tga
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