Cucurbita maxima (winter squash): 111471885
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Entry
111471885 CDS
T05246
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
cmax
Cucurbita maxima (winter squash)
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cmax03009
]
111471885
Ribosome biogenesis [BR:
cmax03009
]
Eukaryotic type
90S particles
Other 90S particles
111471885
Pre-60S particles
Other pre-60S particles
111471885
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
111471885
NCBI-ProteinID:
XP_022973320
UniProt:
A0A6J1IB23
LinkDB
All DBs
Position
Unknown
AA seq
1147 aa
AA seq
DB search
MSEGTQHQRQERDKDDAEVVSLSDASDICAQLMERYSKSSAPQHSHLLASAVAMRSILES
EALPLTPAGYFAAAISAIDNASVSDTLDLTALSALLSFLAITLPLVPPTGISAPNASEAV
GVLVLLLGKNSLTVSTVRAAVKCLGILLGFCNLEDWGSVQLGFDTLLKFSVDRRPKVRRC
AQDSLITLLNSLKDPAIKKEASKLVFSFLEGCMPSAIKLSTSSRIDGREVDNQSNDQHLD
VLHMLNVITLAIPLLSKKVRLKMLKELIKLVEPHYSVVTGHSFKAIELILKSSKAGVFAS
EVESIIVSIGSYLSLGDANPLDTVLTAATLLKCAMDAGGSSIAIRNLPVVCGYMTGLLTS
DASKALHASGILKELIQDHVDQECLIGKDPCLEDCNLERIEVQAIKSTCGVFEDVLNSYD
GDLGKYIIDIISDLFLKLGTTSFTYMKHILLKLADLINSAGNISHVDNLQNCVGSAVTAM
GPEKILTLIPISINAGDLTVQNMWLIPILQSHVTGASLGYYLEYIVPLAKSFQHESCKVK
KAATRKNLQTCAHKLWRLLPAFCRHPSDMHQSLGMLTELIITLLKEGSFMHEDIAVALQI
LVNNNTVAPNSSEASAYSKKTASKNRKALVSSSAKLLQPLAELFVGSVPTMRSHLKDTIG
CLASMTDSRMTKNVFASLLERFQFLNTKGEFEEPRANADELAQNAEGNSGTREIDSRRCV
MLKLASAIIRGAEEDLIDLIYKFVKFAFQASYELGHVEAYQTLSRILEEHAWFASSRFSE
LVEMLIDLQSPADTSSQRSRFACFHILLVHSLKVNITSEEESNKAFLMLNEIIVALKSAE
EDNRKAAYDVLHCISSNLKDLSLTNSDVHKKFVAMILGYLSGASPHVKSGAISALSVLVY
EDADICLSIPDLVPSILSLLQGKAIEVIKAVLGFVKVLVSSMQAKDLQSIVSDILLAALP
WSSVSRHHFRSKVTVILEILLRKCGYAAIEGVSPDKYKGFIKSLFEKRHNKTSSKDAEDA
NTDVADSYSNGVRDKQLDGLETAPKKNVAGQYRKRKWEKSSGFIGRKNDNVFTEDGDRSK
MIKRAAISSSKRSSTMDGFGDSRTADFSRHDAPRKAQQRGNKSGKKHQKERFGNPVKASK
FYHKSSR
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaaggaactcaacaccagcgacaagagcgggacaaagacgatgctgaagttgta
tctctcagtgatgcttcagacatctgcgcccaactcatggagcgctattccaagtcctcc
gctccacagcacagccatctcctcgcttccgccgtcgccatgcgctctattctcgagtct
gaggccctccccctcacccccgctggatactttgccgccgctatttccgccattgataat
gcttcggtttccgataccttggaccttactgccttatctgctttgttgtcctttttagcc
attacacttcctttggtgccgcctacggggatttctgctcctaatgcaagcgaagcggtg
ggtgtactggtgctactattgggaaagaatagcttgactgtgtccaccgtgagggctgca
gtgaagtgcttggggattttgttaggattttgtaacttggaggattggggctcggttcag
ttaggctttgatactttgctgaagttttcggttgaccggcgtcccaaggttcgacgttgt
gcccaagattcgcttattacgcttttgaattctttgaaggaccctgctatcaagaaagag
gctagcaaattggttttttcttttctggaaggctgcatgccctcggcaattaaattaagc
accagcagccgtattgatgggcgtgaggtagataatcagtcaaatgatcaacatcttgat
gtccttcacatgctgaatgtgatcactctagctattccattactatctaaaaaagttcgt
ttgaaaatgcttaaagaattaattaaacttgtagagccacattactcggtagttacaggg
cacagtttcaaagctatcgaacttattcttaaatcttcaaaagctggagttttcgcttcg
gaggttgaaagcattattgtttcaattggctcatacctttctttgggagatgcgaacccc
ttggacacagtgcttactgctgccacgttgttgaaatgtgccatggatgcaggaggttct
agcatagcgatcagaaatcttcctgtagtttgtggttatatgacaggccttttgacttcc
gatgcaagtaaggctttacatgcttctggtatattgaaggagttaatacaggatcatgtg
gatcaagaatgcttgatcggtaaagatccttgtctagaagactgcaacctggagagaatt
gaagtacaagccataaaatcaacttgtggcgtttttgaagatgttctgaatagttatgat
ggagatcttgggaaatatattattgatatcatatctgatctgtttctcaaactaggaaca
acttctttcacctatatgaagcatattttgctcaaacttgctgatttgataaatagtgca
gggaatatatctcatgttgataatcttcagaactgtgtaggatctgctgtaactgctatg
ggacctgagaagatacttactcttattcctatatccattaatgctggtgacttaaccgtg
cagaacatgtggttgataccaattctacaaagtcatgttactggagcatcacttgggtac
tatctggaatatattgtgccccttgcaaaatcatttcagcatgaaagttgtaaagttaag
aaggccgcgacaagaaaaaatctgcagacatgtgcccataaattatggagactactacct
gcattttgtcgccatcctagtgatatgcaccaaagtcttggaatgcttactgaacttatt
attacacttcttaaagaaggctcctttatgcatgaagatatagctgttgccttacagatc
cttgtgaataataacacagttgcaccaaattccagtgaagcatctgcttattcaaagaaa
acggcaagcaagaacaggaaggcgttggtatcatcttcagctaagttgcttcagcctcta
gctgagttatttgttggttctgtaccaacaatgcgctcacatttgaaggatacaattgga
tgcttggcttccatgacggactctaggatgaccaagaatgtttttgcgtcactgcttgag
aggtttcagtttctgaataccaagggtgagtttgaggagccaagagccaacgctgatgaa
ctagctcagaatgctgaaggaaattctgggacaagagagattgatagtcgaagatgtgta
atgttgaagctagcttcagctatcattaggggagctgaggaggatttaattgatctaatc
tataaatttgttaagtttgcttttcaggcatcttatgagctgggccatgttgaagcgtat
caaactctgagcagaattctggaggaacatgcttggtttgcttcttctagattttctgag
ctggtagaaatgttaattgatctgcaatctcctgctgatacttcatctcaaagaagtcgg
tttgcttgttttcacattcttctggttcattcattaaaggttaacattacctcagaggag
gagagcaacaaggcttttctcatgctcaacgagatcatagttgcattaaaaagtgcagag
gaagacaacaggaaagcagcttatgatgtacttcattgtatcagttccaacctaaaagat
ttgtcacttacgaattctgatgtgcataaaaagtttgtggccatgatattaggctatctg
tctggtgcatctcctcatgtaaagagtggagcgatctctgcactctcagtgctggtctat
gaagacgcagatatttgtctttcaatccctgatcttgtgccctccatcttatctttgcta
caaggaaaggctatagaagttataaaggcagtgctagggtttgtgaaagttctggtttct
tccatgcaagctaaagatcttcagagcatcgtttctgatattcttttagcagcgctacct
tggtcatctgtctcaaggcatcattttcgatcaaaggtcacagtaattctggagattctc
ttacggaaatgtggttatgctgcaattgagggtgttagtccggacaaatacaagggtttc
atcaagtctcttttcgagaaacgccataataagaccagttccaaggatgctgaagatgct
aatacagatgttgcagattcatattctaatggggtaagagataagcaacttgacgggctg
gagactgcgcccaagaaaaatgtagctggtcaatacaggaaaaggaagtgggaaaaatct
tctggtttcatcgggagaaaaaatgataatgtattcactgaagatggtgatagatctaag
atgataaaaagagctgcaatctccagtagtaagaggagttcgactatggatggtttcgga
gacagtcgtacagcagatttttcgaggcatgatgctcctagaaaagctcaacagagagga
aacaaatctggaaagaagcatcagaaagaaagatttggtaaccctgttaaagcttcaaaa
ttttatcacaagagttctagatga
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integrated database retrieval system