Cucurbita maxima (winter squash): 111472080
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Entry
111472080 CDS
T05246
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
cmax
Cucurbita maxima (winter squash)
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmax03021
]
111472080
Transcription machinery [BR:
cmax03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
111472080
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
111472080
NCBI-ProteinID:
XP_022973546
UniProt:
A0A6J1I8Y2
LinkDB
All DBs
Position
Unknown
AA seq
1610 aa
AA seq
DB search
MDQPQRSSSVTAVSTSRAYQFHPARAAIANLFDLYLGRSNRLKPEDSAREPPNKAQKRVL
AINRELPPRNEQFLLDFEQIQNQFADYDQLHAVTESVLISLVVQCSGHVPRAEFLLFALR
SLCSIGYINWDTFLPSLLSSISSAEVSLGQGSQAAPTTVSTTNLSQSGVLPSSNPVPNSS
TFQSSNPASPLPSIHGISSPAQSSIDPTSCTALSPIKSSDLSGTGLPSAVRVNSFLRNNA
ISSLRQLCCKIILSGLKFDLKPVTRADIFSHMLNWMVNWDQRQQGIEESENMKSWRPDKA
LIEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLILEIHRRRDMMA
MHMQMLDQHLHCPTFGTQRIFSQTMQNISGEAVASSRHSPITYPSVLGEPLHGEDIASAI
QRGTRDWERAMRCIRHALRTTPSPEWWKRVLLVAPGYRSPAQGLSPGAVFTSEMICEATI
DRIFELLKLTNSEIHCWQEWLVFSDIFYFLMKSGCIDFADFVAKLFSRVTEGGHHVLRTN
HVTWLFAQIIRVELVMSALNSDARKVETTRKILSFHREDKSADPNNPQSILLDFISSCQN
LRIWSLNTTTREYLNNEQLQKGKQIDEWWRQASKGDRMMDYMNMDDRSIGMFWVVSYTMA
QPACETVMNWLSSAGVPELSSAQNLQTNERIMIMREVSPLPMSLLSGFSMNLCSKLTYQM
EESLFSGQAVPSIALAETYTRLLLLAPHSLFRSHFNHLAQKNPSLLSKPGVTLLVLEILN
YRLLPLYRYEGKSKALMYDVTKIISALKGKRGDHRVFRLAENLCMNLIFSLRDFFFVKRE
GKGPTEFTETLNRLAVVTLAILIKTRGIADADHLLYLQTMLEQTMATSQHTWSEKTLRYF
PPVLREALIGRIDKRGVAIQAWQQAETTVINQCNQLLAPSADPTYVITYISHSFPQHKQY
LCAGAWILMQGHPENINCTTLARVLREFSPEEVTANIYTMVDVLLHHIQIEPQHGHSTQD
ILLKVCANLSFFVWTQELLPLDILLLAFIDRDDDPNALRIVISLLDRQELQQRVKLYCIN
RVSPEHWLHSAVFKRNDLQKALGNHLSWKDRYPVFFDDIAARLLPVIPLIVYRLIENDAV
DQADRVLAMYSPFLAYHPLRFTFVRDILAYFYGHLPNKLIVRILNVLDISKIPFSESFPH
YISSPGPVMCPPMDYFATLLLGIVNNVIPSLQTSKPGAASDTSSNSMRPSHNKAPGTTPP
GATSASDSQKAFYQIQDPGTYTQLVLETAVIELLSLPVSAGQIVSSLVQIVVNIQPTLIQ
SSNNFHGAPSSMGQGSALPTSPSGGSTDSLNAGRSNTSASGINTPNFVSRSGYTCQQLSS
LMIQACGLLLAQLPQEFHVQLYLEASRIIKETWWLSDATRSLGELNSAVGYSLMDPTWAA
QDNTSTAIGNTVALLHSLFSSLPQEWLEGAHAIIKHLRPVTSVAMLRIVFRIMSPLLPKL
ANAHSLFCKTLSSLLSVLVDVFGKNTQTSIPVEAAEISDLIDFLHHVVHYEGQGGPVVAN
SKPRQEVLGIIGRALENLRPDVQHFLSHLKPDTSSSIYAATHPKLVQNPA
NT seq
4833 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaccacagcgatcgtcatcagtaacggcggtctccacttcccgcgcttaccag
tttcacccagctcgagctgccattgccaatctcttcgacctctacttgggaaggagtaat
cgtctaaagcccgaagattcagctcgagaacctccgaacaaggcccaaaagcgtgtacta
gctattaacagagagcttcctcctcggaacgagcagttccttttagattttgagcaaatt
cagaatcaatttgcagactatgatcagttgcatgctgtgactgaatcagttctcatctcc
ctagttgtacagtgcagtggtcatgtaccaagggcagaatttcttctctttgctttacgg
agtttatgcagtataggttacattaattgggacacttttttgccatcccttctttcttca
atctcatctgcagaagtttccctgggccagggaagtcaagctgcgcctactactgtctca
actactaatttatcgcagtctggggtgcttccatcctcaaacccagtccctaacagttct
acttttcagtcttccaatcctgcctctccgttaccatcgattcatggaatcagttcgcct
gctcaatcaagcatcgatccaacttcttgcacagcattatcaccaatcaaatcctctgat
ctttcggggactggattaccatctgcagttagggtcaattcatttttgagaaataatgca
ataagcagtctacgtcagctttgttgcaagattatcttaagtggtcttaaatttgatttg
aaaccagtgacgcgtgctgatattttttcccacatgcttaattggatggttaattgggac
caacggcaacaagggattgaggaatcagagaatatgaaatcctggaggcctgacaaggct
ctcattgaatggctacatagctgtttggatgtggtgtggcttttggttgaggagaataaa
tgtcgtgtgcctttctatgaattactacgcagtggcttgcaatttatagataacattcct
gatgatgaagccttatttacactcatcttggagatccataggaggcgagatatgatggca
atgcacatgcagatgttggatcaacaccttcactgccctacatttgggactcagcggatt
ttttctcaaacaatgcagaacatatctggggaagcagtagcaagctcgcgccattcacca
atcacatatccaagtgtacttggtgaacctctgcatggagaggatattgcatcggctatt
cagagaggaactcgagactgggaaagagctatgcgttgtataaggcatgctcttcgaaca
actccatcacctgaatggtggaagcgtgtgcttcttgtagctcctggctataggtctcct
gcacaaggacttagtccgggtgccgtttttacatctgagatgatatgtgaggcgacaatt
gatagaatatttgagctattgaagctgacaaattcagagatacattgctggcaagagtgg
ctcgtcttctcagatatattctattttcttatgaaaagcggatgtattgattttgcggac
tttgtggctaagctattctctcgtgtaacagagggaggtcaccatgtcttaaggacaaac
catgtcacttggctttttgcacagatcattcgtgttgagcttgtgatgagtgctttgaat
tcagatgcaaggaaggtggagacgacaagaaaaatattatcatttcatagagaagataaa
agtgctgatccaaataatcctcaaagcatcttgcttgattttatcagtagttgtcagaac
ttgcgtatttggtcattgaacacaacaacaagagaatatttgaataatgagcagctacag
aaaggaaaacaaattgatgaatggtggaggcaagcaagtaaaggtgatcgtatgatggat
tatatgaacatggatgacagatcaattgggatgttttgggttgtctcatacaccatggcg
caaccagcatgtgaaactgtgatgaattggttatcatctgctggggttccagaactatca
tcagcacaaaatttacagaccaatgagaggataatgataatgcgagaagtgagcccattg
ccgatgtctttgttatcaggtttttcaatgaacttgtgctcaaagctgacctatcaaatg
gaagaatctttattttctggacaggctgttcccagtattgcattggctgaaacctatact
agattgcttctcctcgcaccacactcattgtttcgttcacattttaatcatttagcacaa
aaaaacccatcccttttgagcaaaccaggagttacgcttctagtgcttgaaattctgaac
tatcggttgcttcctctctacaggtacgaaggcaaaagcaaggctttgatgtatgatgtt
acaaaaataatttctgcacttaaaggaaagcgtggagaccatcgagtatttagattggct
gaaaacttgtgcatgaatcttattttttcattaagagattttttctttgtgaaaagggaa
gggaagggtccaactgaatttacagagacactaaatcgattggctgtggtcactcttgct
atcctcattaagacacgaggaatagctgatgctgatcacttgctttatcttcaaacaatg
ctagagcagacaatggccaccagccaacatacttggtcagaaaaaactctgcgatacttc
ccacctgttcttcgtgaagcattgattggaagaatagataaaagaggtgtagcaattcaa
gcatggcaacaggcagaaactactgtgatcaaccaatgcaaccaacttctggccccatca
gctgatccgacgtatgtgataacctacatcagtcatagtttcccgcagcataaacaatat
ttatgtgctggtgcatggatactcatgcaagggcaccctgaaaatattaactgtacaacc
ttggcacgggtattgagagagttttcaccggaagaagtaacagctaacatttacacaatg
gtagatgtgctgcttcatcacattcagattgagcctcagcatggacattccacacaggat
attttgcttaaagtttgtgccaatctttcatttttcgtatggactcaagaattacttcct
cttgatattcttctcctagctttcattgaccgtgatgatgatcccaatgctctacgcata
gtgattagtttacttgataggcaagagcttcaacaacgagtcaaactatattgtatcaac
cgagtttcacctgagcactggcttcactctgcagtgttcaaaagaaatgatttacagaag
gctcttgggaatcatctttcatggaaggacaggtatcctgtattttttgacgatattgca
gctcgattacttccagtaattccattgatagtttataggctcattgaaaatgatgctgta
gatcaagctgacagagtattggccatgtactctccttttttggcctaccaccctcttaga
tttacatttgttcgtgatatactcgcatacttctatggtcatctacctaacaagctcatt
gttcgaattttgaatgtacttgatatcagcaagattccattttctgagtcgttcccacat
tacattagttcccctggtcctgtcatgtgcccgccaatggattactttgctaccctcttg
ttggggatagtcaataatgttataccttccttacagacatcaaaacctggagcggcaagt
gatacgtcaagtaattcaatgcgtccatcgcataacaaagcccctgggacaacgccaccg
ggggcaacaagtgcttccgacagccaaaaagcattttatcaaattcaggaccctggcaca
tatactcagcttgttcttgaaacagcagtcatagaattactttctctccctgtctcagct
ggtcagattgtgtcatcgctggttcaaattgttgtcaacatacaacctactctaattcaa
tcgagcaacaattttcatggagctccgagcagtatgggtcaaggatcagcattaccgaca
tctccttctggaggaagcacagactccttaaatgctggaagatcaaatacctcagcatct
ggaataaatactcctaattttgtttcacgaagtgggtatacatgccaacaactttctagc
cttatgatccaggcatgtggtcttctactagcgcagcttcctcaagaatttcatgtacag
ttgtatctagaggcatcacgcattataaaagaaacttggtggctgtctgatgcaacaaga
tccttaggcgagctaaactccgctgttggttactcgttgatggatccaacatgggcagca
caagacaatacctcaacggctattggtaacacggttgcactgcttcactctttatttagt
agcctcccacaggaatggctagaaggggcacatgcgattatcaaacatctcagacccgtc
acatcagtagcgatgctgagaatagttttccgtattatgagtccactgctccccaaactt
gccaatgctcatagccttttctgtaagactctctcctcacttttaagcgtattggtggat
gtatttgggaagaacacacaaacatcaataccagtggaagccgcagaaatatcagacctc
attgactttctgcaccatgttgtccattatgaggggcagggagggcctgtagtagctaat
agcaagcctcgacaagaagttttgggcattataggaagagctttggaaaatctgcgtcca
gatgtgcaacacttcctttcccacttgaagcctgacactagttcttctatctatgctgca
acgcatccaaagctggtccaaaacccagcttga
DBGET
integrated database retrieval system
