Cucurbita maxima (winter squash): 111472381
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Entry
111472381 CDS
T05246
Name
(RefSeq) RNA polymerase I-specific transcription initiation factor RRN3-like
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
cmax
Cucurbita maxima (winter squash)
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmax03021
]
111472381
Transcription machinery [BR:
cmax03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
111472381
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRN3
Motif
Other DBs
NCBI-GeneID:
111472381
NCBI-ProteinID:
XP_022973839
UniProt:
A0A6J1IFT9
LinkDB
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Position
Unknown
AA seq
626 aa
AA seq
DB search
MGVEFENGQAQFQDMEGVNFTDDQLVDFIRGFLTSVSLGNTDGYHQLVGVIHHRDRLSAD
EVALLVTCLKALSGAVSCIDVVLHESLLAAIFKMSLWDYGPNVMDALIELITSLAVSSGK
YVDSCLDMLVTNFMPPHSYKDFLKKPHGLTRKDEVLSRVHTALKDISDLVPLAPLRLELI
VVHKMQRVFFKESLTTIYVENMLRLEKGAMSEFVGRKILTALVDKLLDLDVEIGWDDILQ
DDFSKGIFEIELEDDNESTDDIDEDSSELPRELSRKSLGGNVIAETLDSLIVLTFEHLES
CERDGRLNEVFDILLLSFQRTVLTAYKSKFAQFVIFYACALDLEVCGARFAVTLADMFIS
RNGLPLTRMSAISYLASYLSRGKFLSTSLVTTILKRLVDWCLEYGKTHDVDLNPKAHKIF
YSGCQAIMYVLCFRMRSILEIPRLKSQLLLMPIGRILTHRLSPLKVCLPSIVEEFLRQAK
VANLFTPSETFIFNGLLESEYSKTFGGIERLDMFFPYDPCLLKRCDRYLRPYFVYWSMVR
PTYDEEEEDEGSSDEDVAEVFPDKIEENLMDDEAMARSYDDREFDLDEFDNALDKMSITP
RNSLPLRQDCVRMPSRIRPSMSPESL
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgggggtggaatttgaaaacggccaagctcagtttcaggatatggagggtgttaatttc
acagatgatcagttagttgatttcattagggggtttcttacttcagtgtcgctgggaaat
actgatgggtatcaccagcttgttggtgttatacaccacagagatcgattatccgctgat
gaggttgccttgctcgtgacatgtttgaaggcactatctggagcagtttcttgtatagat
gtcgttctccacgaatcacttcttgcggcaatttttaaaatgagcttgtgggattatgga
cctaacgtgatggatgccctgattgaactaataacatccctggctgtttcgagtggaaaa
tatgtggattcatgcttggatatgcttgtaactaatttcatgccgccccattcctacaag
gatttcctgaagaagccgcatggtcttacaagaaaggatgaagttctttctcgagtgcac
acagctctaaaagacatctcggacttggttcctcttgcacccttgagattagagctcata
gttgtccataaaatgcagagagtctttttcaaagaatctttgaccacaatatatgtggag
aacatgctaaggttggaaaagggtgcaatgagtgaatttgttgggaggaaaatcttaact
gcactggtggataagcttttagatctggatgtggagattgggtgggatgatatcctacaa
gacgatttcagtaaaggaatttttgagattgaactggaagatgacaatgaatctacagat
gatattgatgaggattctagtgagcttccaagagaactaagtcgtaagagcttaggtgga
aatgtaattgctgaaacgttagatagcttgatagtgcttacatttgaacatcttgaatca
tgtgagcgtgatggacgattgaatgaggtttttgacattttactcctatcatttcaaaga
actgttctgactgcttacaagtctaaatttgcccagtttgtcatattctatgcttgtgca
ttagatctggaagtttgtggtgcaagatttgccgttacgctagctgatatgttcatttcc
cgcaatggtcttccccttaccaggatgagtgctatttcgtatcttgcgagttatttgtct
cgcgggaagttcctgtcaacctctttggttaccactatattgaaaagattggtggattgg
tgtttagaatatggcaaaacacatgatgttgacctgaacccaaaggctcataaaatattt
tattctggttgccaggccataatgtatgtgctttgcttccggatgagatcgattttggag
ataccacggctgaagtcacaacttctgcttatgcctataggtcgaatcttgacgcatagg
ttaagcccactgaaggtttgcctaccgtctattgtcgaggaatttctccggcaggcaaaa
gttgctaatttatttacaccatcagagacttttatattcaatggtttgctggagtctgaa
tattcaaagactttcggtgggattgaaaggctcgacatgttttttccgtatgatccttgc
ttgctgaaaagatgtgacagatatcttcggccatattttgtatattggtcgatggttaga
cctacatatgatgaagaagaagaagacgaaggtagcagcgatgaagatgttgcagaggtt
ttcccggataaaatcgaggaaaaccttatggacgatgaagcaatggcaagaagctacgac
gatagagagtttgaccttgatgaatttgataatgcattagataaaatgtccatcacacca
agaaattctctcccgttaaggcaagattgtgttcgaatgccctcacgaatccgaccctcg
atgagtccagaatctttgtga
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