Cucurbita maxima (winter squash): 111472572
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Entry
111472572 CDS
T05246
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 4 isoform X1
KO
K18999
RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:
3.1.3.16
]
Organism
cmax
Cucurbita maxima (winter squash)
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cmax01009
]
111472572
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmax03021
]
111472572
Enzymes [BR:
cmax01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
111472572
Protein phosphatases and associated proteins [BR:
cmax01009
]
HAD phosphatases
Fcp/Scp phosphatases
111472572
Transcription machinery [BR:
cmax03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
111472572
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
BRCT
PTCB-BRCT
BRCT_2
TPR_TTI1_2nd_yeast
HEAT_PSME4_mid
Motif
Other DBs
NCBI-GeneID:
111472572
NCBI-ProteinID:
XP_022973946
UniProt:
A0A6J1IA13
LinkDB
All DBs
Position
Unknown
AA seq
444 aa
AA seq
DB search
MSLATNSPAHSSSSDDFAAFLDVALESHSSDSSPNKNAEVGNNVESSRMKRRKLVCSEED
ILCGVEEQSLEVLSKQQLCSHPGSFGNMCIICGQRLDEESGVTFGYIHKGLRLNNDEINR
LRNIDMKSLLQHKKLILVLDLDHTLLNSTQLGHLTPEEEYLWSQIDSLEDVTKGSLFLLN
SVHTMTKLRPFVHTFLKEASQLFEMYIYTMGERAYASEMAKLLDPKREYFNSKVISRDDG
TQKHQKGLDIVLGQESAVLILDDTENAWTKHKENLILMERYHFFASSCHQFGFNCKSLSE
LKSDESETDGALATILKVLKQVHNIFFNELSDDLVDRDVRQVLKTVRSKVLEGSKVVFSR
VFPTIFQAENHHLWKMVEQLGGTCSTELDSSVTHVVSTDAGTEKSRWALKEEKFLVHPRW
IEASNYFWKRQAEDNFPVEQSKKQ
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgagccttgcaactaattctccagctcactcatctagtagtgacgattttgctgcattt
cttgatgtagccctagaatcccattcttctgactcgtcaccaaacaaaaatgccgaggtt
ggcaataatgttgaaagttcgaggatgaaacgtcgtaagctggtatgctcagaggaggac
attctgtgtggagttgaagagcaaagtttagaagtattatcaaagcaacaattatgcagt
catcctggttcatttggaaatatgtgtatcatctgtgggcagaggttggatgaggaatct
ggcgtgacgtttgggtatattcataagggactccgacttaataatgatgaaattaaccgg
ctacgcaacatcgacatgaagagtttgttgcagcataaaaagcttatcctggttcttgat
ctggatcacacactgttaaattcaacccagctggggcatttgacacctgaagaggagtat
ttatggagtcaaatagattctctagaagatgtcacgaaaggcagccttttcctattgaat
tccgtgcatacgatgacaaagttgagaccatttgtccatacgtttttgaaagaagctagt
caattattcgagatgtatatatacactatgggggagcgagcatacgcgtccgaaatggca
aagctgttggaccccaaaagggagtattttaattccaaagtgatttctagggatgatggc
actcaaaagcatcaaaaaggtcttgatatcgtgctgggtcaggaaagtgctgttctgatc
ctcgatgataccgaaaatgcatggacaaagcataaagaaaacttgatattgatggagaga
tatcacttttttgcttcaagttgtcaccaatttggcttcaactgtaaatctctatctgag
ttgaagagtgatgagagtgaaactgatggggcactggcgaccatcctgaaagttcttaag
caagttcataatatattctttaatgaactctcggatgatttggttgacagagatgtgagg
caggttttgaagacagttcgaagcaaagttcttgagggaagcaaggtcgtcttcagccga
gtctttccgaccatatttcaggccgaaaaccatcatctttggaagatggtagagcagctg
ggaggcacttgctcaaccgaactcgactcgtccgtgacacacgttgtctcaacagatgct
ggaacggagaagtcacgttgggcattgaaagaggaaaagtttctggtccatccacggtgg
atagaagcatcaaactacttctggaaacggcaagccgaagacaacttcccggtcgagcaa
agcaagaaacaataa
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