Cucurbita maxima (winter squash): 111472751
Help
Entry
111472751 CDS
T05246
Name
(RefSeq) ATP-dependent DNA helicase 2 subunit KU80
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
111472751
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmax03400
]
111472751
DNA repair and recombination proteins [BR:
cmax03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
111472751
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Ku_PK_bind
Ku_N
Ku_C
Motif
Other DBs
NCBI-GeneID:
111472751
NCBI-ProteinID:
XP_022974163
UniProt:
A0A6J1IFE5
LinkDB
All DBs
Position
Unknown
AA seq
699 aa
AA seq
DB search
MARNREILVLVLDVGPSMHSVLPEVEKVCSMLVEKKLIYSKYDEVGIVLFGTKETKNELT
EEVGGYQHVVVLQNMKVVDGDLVDVLKRLPRGTVSGDFLDAIIVGMDMLIKKFGETEKGK
KRLCLITDALFPIKEPYEGTKEDQVSAIAQQMTKHGMRMDSVVVRRRFSRDADEKMMDEN
DVLLNIFSEKTNAKMVYVESPTSLLGAIRTRSISPVTIYRGDLEISSVVKMKVWVYKKTS
EEKFPTLKRYSDKAPSTDKFATHEVKVDYEYKSVEDTSKVVPPEHRIKGYRYGPQVIPIS
AAEWDAVKFKPEKSVKLLGFTNASNIMRHYYMKDVNVFIAEPGNKRAIVAVSALARAMKE
MDKVAIVRCVWRQGQGSVVVGVLTPNISEKNGIADSLYFNVLPFAEDVREFQFPSFNNFP
ALMQPSEEQQEAVDEFVKMLDLAPSGREEILQPDFTPNPVLERFYRHLELKSKDPAAAVP
PLDTTLQKITKPDPDLLSQNKSAIGTFHRRFELKENPKLKKPRRLYLREKPSGSSDKEDN
EEISAQIVVSAANTSVVKVEKIGDSTPLQDFEAMMSRRDNPEWINKAINGMKNKIFDLVE
NSCDGDNYPKALEYLLALRKGCIIEQEPTQFNDFLRHLCKFCLEKNLHSFCELLAFERLN
LISKKEAADSEVADDEARSFLVKMEPKFEPKMEPKLEQI
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcaacagggaaatcttggtgcttgtgctggatgttggtccatcaatgcactct
gttctccctgaggttgaaaaagtgtgttcaatgctggtggagaagaagctgatttacagc
aaatatgatgaagtgggaattgttctatttggaaccaaagaaacgaaaaacgagctaaca
gaggaagttggtgggtatcaacatgtggtggttctacagaacatgaaagttgttgatgga
gatcttgttgatgttttaaaacgactccctcgagggaccgtttccggtgattttcttgat
gccataattgtgggaatggatatgttgattaagaaatttggagagacagaaaaaggaaag
aaacgcttatgtcttattacagatgctctattccctataaaagaaccttatgaagggact
aaagaggaccaagtttcggccattgcgcagcagatgacaaaacatggcatgagaatggat
agtgtcgttgtgagaaggaggttcagtcgggatgcagatgagaaaatgatggacgagaac
gacgttctcttgaacatattttcagagaaaacgaatgcaaaaatggtgtatgtggagagc
ccaacttcgttattgggtgcaatccggactcggagtatatcgcccgtgacaatttataga
ggcgatcttgaaataagctccgtcgtcaagatgaaggtatgggtttataagaaaacatca
gaagagaagtttcctactctgaaaagatattctgataaggcaccttcaactgataaattt
gccacacatgaagtcaaggtagattacgagtacaaaagcgtggaagacactagtaaggtc
gtgcctccagaacataggattaaaggatatcgttacggacctcaagtgattccgatatcg
gcggctgaatgggatgcagtcaagttcaaaccagaaaagagcgtgaagcttctcggattt
acgaatgcatcgaatataatgcggcactactacatgaaagacgtcaatgtctttattgct
gaacctggcaataaaagagccattgttgcagtttctgcactagcaagagcaatgaaggaa
atggacaaagtggcaatagtgcgatgtgtttggagacaaggacaggggagcgtcgtggtc
ggtgtcttgacacccaacatatcggagaagaatggtattgccgattcattatacttcaat
gtacttccctttgcggaggatgttcgagaattccagtttccttctttcaacaattttcca
gcattgatgcagccgagcgaagaacagcaagaggcagtggacgaattcgttaagatgctt
gatctcgcaccatctggacgagaggaaattctgcaaccggatttcacaccaaatcctgtt
cttgagcgcttttatcgtcatctcgagttgaaatcgaaggatccagctgcggctgtacct
ccactcgatacaactctccagaagattaccaagccagatcccgacttgttgtctcaaaac
aaatctgctattggcacattccacagaagattcgaactcaaggagaatccgaagctaaag
aaaccaagaaggctatatttacgcgaaaaaccatccggttcgagcgacaaagaggataat
gaagagatttctgctcaaattgtcgtctctgctgcgaatacgtcggtagttaaggtagaa
aaaatcggagattcaacacctctccaagattttgaagctatgatgtctagaagagataat
ccagagtggatcaataaagcaatcaatggcatgaaaaacaaaattttcgacctcgtcgaa
aactcctgcgatggtgataactatccaaaagctctcgagtatctgctcgcgctacgcaag
ggttgcattattgaacaagaaccgacgcaattcaacgatttcctccgccatctctgtaaa
ttttgcctggaaaaaaacctccatagcttctgcgagttacttgcattcgaacgacttaac
ttgatctccaagaaagaagcggccgacagtgaagtagctgatgatgaagctagaagcttt
ttggttaaaatggagcctaaatttgagcctaaaatggagcccaaattagagcaaatctag
DBGET
integrated database retrieval system
