Cucurbita maxima (winter squash): 111472942
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Entry
111472942 CDS
T05246
Name
(RefSeq) RNA pseudouridine synthase 7-like isoform X1
KO
K15454
tRNA pseudouridine32 synthase [EC:
5.4.99.28
]
Organism
cmax
Cucurbita maxima (winter squash)
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cmax03016
]
111472942
Enzymes [BR:
cmax01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
111472942
Transfer RNA biogenesis [BR:
cmax03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
111472942
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-GeneID:
111472942
NCBI-ProteinID:
XP_022974305
UniProt:
A0A6J1IDM1
LinkDB
All DBs
Position
Unknown
AA seq
389 aa
AA seq
DB search
MTSKRKRGEEGMGEGEIVWQTPANAPQRCDYIFHNGRRHVRPYYFEFIAHVKNRWAGKSV
VDLFTEEFKGRPYEYYVDAVKCGRIQVDGEMVPTSYIVKTSQKISHFLHRHEPPVMALEV
KILKEEADVLTVYKPASVPVHPCGQYRKNTVVGILQAEHGLAPLFPIHRLDRLVSGLLII
ARNASKADLFRQQIESGLVKKQYIARVVGVFPEEEQVVDVHINYNAREGRSTAEMVDSCK
DTMAKGKAAQTKFTCISSDGVHSIVLCEPVTGRTHQIRVHLQYTGYPIANDALYLTKVAS
GRSMEKTTADRAAAISASSTAHDIEEDCVNARKENSSEDFRIDPMCTNCPNLAPKGYDGE
EEGLWLHCVRYSGPGWIYECPYPEWASLK
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcaaaaggaaaaggggagaagagggcatgggagaaggagagatcgtatggcaa
accccagccaatgcccctcagcgatgcgattatatatttcacaatgggaggcggcacgtt
agaccttactacttcgagttcattgcccatgttaagaatcgatgggccggcaaatccgtt
gtcgacttgtttactgaagagtttaaaggccgaccatacgagtactatgttgatgcagtc
aaatgtggtcgcatacaagtcgatggggagatggtgcctacatcatatatagttaaaaca
tctcaaaagataagccattttctgcacaggcatgaaccgcctgtaatggctttggaggtg
aaaattctcaaagaagaagcagatgtgctgacggtttacaagcctgcgtctgttccagtt
catccatgtggtcaatataggaagaacaccgttgttggcatacttcaggcagagcatggt
ttggcacctctatttcctatacatcgactagaccgtcttgtctcaggacttcttatcatt
gctagaaatgcatcgaaagctgatcttttcagacaacagattgaatctgggctggtgaag
aaacagtatattgcaagggtggtgggtgtgtttcccgaagaggagcaagtggtcgatgtt
cacataaactacaatgctcgagagggaaggagcacagcggagatggttgattcttgcaag
gatactatggcaaaggggaaggccgctcaaacaaagtttacttgcatcagttccgatgga
gtccatagcattgttttatgtgaaccggtcactggacgaactcatcaaatccgtgtgcat
ttgcagtacacagggtatcctattgccaacgatgcactgtaccttacaaaagtagcttct
ggtcgctccatggaaaaaacaactgcagatagagctgctgcgatatctgcgagttctaca
gcacatgatatcgaagaagattgtgttaatgcacgcaaagaaaactcaagtgaagatttt
aggattgaccctatgtgcacaaactgtccaaatttggctccaaaaggatatgacggagaa
gaagagggattgtggctgcattgcgttcggtactctggaccaggatggatctacgaatgc
ccatatccagaatgggcttcacttaaatag
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