Cucurbita maxima (winter squash): 111473444
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Entry
111473444 CDS
T05246
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
cmax
Cucurbita maxima (winter squash)
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmax04131
]
111473444
04121 Ubiquitin system [BR:
cmax04121
]
111473444
Enzymes [BR:
cmax01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111473444
Membrane trafficking [BR:
cmax04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
111473444
Ubiquitin system [BR:
cmax04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111473444
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-RING_UBOX
zf-rbx1
zf-C3HC4
zf-ANAPC11
zf-C3HC4_3
zf-RING_5
Rad50_zn_hook
zf-WRNIP1_ubi
CxC4
zf-Nse
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
111473444
NCBI-ProteinID:
XP_022974705
UniProt:
A0A6J1IB00
LinkDB
All DBs
Position
Unknown
AA seq
305 aa
AA seq
DB search
MSSRNTHWCYRCEQPVQLRGRDMVCASCNGGFVQELDEMMERGPLDFFGAHGHEYHNRRL
GLLDLFSNFMRQRLIDRNDMRGRLESIPDHGSGFGPWLIFGGQIPVRLSGHGGFEAFFNG
VPGIGVSRNNGGDYFIGPGLEELFEQLSANDRRGPPPASRSSIDAMPVVKITQRHIRSNS
HCPVCQDKFELGSEARKMPCDHMYHSDCIVPWLVQHNSCPVCRQELPAQGSGGSHSSSGS
NNLSRNSRERENSRTNQGRRNPFSSLWPFRASSSDSNHSATTGSSSPALHESTQHQTGYS
GWPFD
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtagaaacacccattggtgttacagatgtgagcagccagttcaactccgtggg
cgggacatggtttgcgctagctgtaatggaggatttgttcaagaactcgatgaaatgatg
gaaagaggtccccttgatttctttggagcccatggtcatgaataccacaatcggaggctt
ggactcctggaccttttctcaaactttatgaggcaacggttgatagacagaaatgacatg
aggggaaggttggaatctattccagatcatggttcaggatttggtccttggttgatcttt
ggtggccaaattcctgttaggttgtctggacatggtgggtttgaagccttttttaatggg
gttcctggaattggtgtgagtaggaacaatggtggtgattattttattggtcctggactt
gaagaattgtttgaacagctttcagcaaacgaccgacgcggaccacccccagcatctaga
tcttcaatcgatgcaatgcctgttgttaaaattacgcaaagacacatccgttcaaattca
cactgccctgtttgccaagataaatttgaattagggtctgaagctaggaaaatgccatgt
gaccatatgtatcattcggattgtatagttccctggcttgtccagcacaactcctgccct
gtttgccgccaagagctgcctgcacaagggtcaggtggtagtcacagctcgtctggaagc
aacaatcttagtcgaaacagccgagagagggagaatagtaggacaaatcaaggaaggagg
aacccattttcaagtttatggccattccgagcatcgagttctgactcaaaccatagtgcg
accactggaagcagctcaccagccctacatgagagcacccaacaccaaacagggtattct
ggatggcctttcgactag
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