Cucurbita maxima (winter squash): 111473637
Help
Entry
111473637 CDS
T05246
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax00040
Pentose and glucuronate interconversions
cmax01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111473637
Enzymes [BR:
cmax01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
111473637
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
111473637
NCBI-ProteinID:
XP_022974867
UniProt:
A0A6J1IBF4
LinkDB
All DBs
Position
Unknown
AA seq
447 aa
AA seq
DB search
MAMAESGGWIRLFLLVVFMLFVETIARVPKEIPEIENRATEILRSSSNASMAERLEDVEA
LGNKHAVDNPEEVAAAVDMSIRNATARRELGFFSCGTGNPIDDCWRCDPNWQQNRKRLAD
CGIGFGRNAIGGRDGRYYVVTDSGNDDPISPRPGTLRHAVIQDEPLWIVFKRDMVIQLKQ
ELIMNSFKTIDARGTNVHIANGACITIQFVTNVIVHGLNIHDCKPTGNAMVRSSPNHVGW
RTMADGDAISIFGSSHIWIDHNSLSNCADGLVDAVMGSTAITITNNYFTHHNEVMLLGHS
DSYVRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQ
GNRYAAPTNPFAKEVTKRVETAESEWKNWNWRSEGDLLMNGAFFTPSGAGASASYARASS
LGAKSSSMVASITANAGALNCRRGHAC
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggcaatggcggaatctggaggatggattcggttgtttcttctcgtggtgttcatgttg
ttcgtcgaaacaattgccagagttcccaaagagattcctgaaattgagaatcgagcaacc
gagatattgcggagctcaagcaatgcatcaatggcagagaggttggaggacgtcgaggct
ctaggtaataagcatgccgtggacaaccctgaagaggtcgctgctgcggttgacatgagc
atacgcaatgccacggcaaggagggagcttggattcttctcgtgtggaaccggcaatccc
attgatgattgctggcgttgtgaccccaattggcaacagaatcggaaacgtcttgcagat
tgtggcattggctttggccgaaatgccatcggtggtcgcgatggtcgatactacgtcgtc
actgattccggcaacgacgaccctatcagtccaaggcctggcactttacgacatgccgtc
atccaagatgaacctctctggattgtgttcaaaagagacatggtgatacagctgaaacag
gaactgatcatgaacagtttcaagacaattgatgctcgtggaaccaatgttcacattgct
aatggtgcttgcatcaccatccagtttgtgactaatgttattgtccatggtctaaatatc
catgactgcaagcccactggaaacgccatggtaaggagctcacccaatcacgttgggtgg
agaacaatggctgatggagatgccatttccatttttgggtcaagtcatatttggatcgat
cataattcactctctaactgtgctgatggccttgttgatgctgtcatgggatccactgca
attacaatcaccaacaattacttcacccaccacaatgaggtaatgttattgggacatagt
gattcatacgttagggataaacaaatgcaagtgaccattgcttacaatcactttggagaa
ggactcatccaaagaatgccaaggtgtagacacggatacttccatgtggtgaacaatgat
tatactcactgggagatgtacgccattgggggcagtgcaaatcctactatcaatagccag
ggtaacagatatgctgcaccaaccaacccttttgcaaaagaggttactaagagggttgag
acagctgaatctgagtggaaaaactggaattggagatcagagggagacctattgatgaat
ggtgcctttttcactccatctggtgcaggggcctcagcaagctatgctagagcctctagt
ttgggagctaaatcttcatccatggttgcttccataacagccaacgccggtgcacttaac
tgccgacgaggtcacgcctgctag
DBGET
integrated database retrieval system