Cucurbita maxima (winter squash): 111473749
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Entry
111473749 CDS
T05246
Name
(RefSeq) eukaryotic translation initiation factor 5B-like
KO
K03243
translation initiation factor 5B
Organism
cmax
Cucurbita maxima (winter squash)
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
cmax03012
]
111473749
Translation factors [BR:
cmax03012
]
Eukaryotic type
Initiation factors
eIF-5
111473749
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
IF-2
GTP_EFTU_D4
GTP_EFTU_D2
MMR_HSR1
ATP_bind_1
Roc
Motif
Other DBs
NCBI-GeneID:
111473749
NCBI-ProteinID:
XP_022974922
UniProt:
A0A6J1IBK8
LinkDB
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Position
Unknown
AA seq
1361 aa
AA seq
DB search
MGRKKPTARDDDGAPAAAQGGGKSKKKTFAVDDDEYSIGTELTEEAQDQEVKVMITGKKK
GKKGNSKASQLKDDDDDDDDVDGVSEIVITGKKKGKSKKGGSSSAFTASSFGLLEEEGKD
GANDDDDDDESVLTAEKDDDEEEDSVIKFSGKKKSSKSSKKSGFSAVSAFGALDDEKDED
VIDDENEEIDDEPVISFTGKKKSSQGGKKAGNAFTGFSGLDYEDEDRNDDKDDGEDFTTM
TFSGKKKKSSKGSKKSGNLFSAALADEENDGDDSISKPGKLDIDGVDEDDVNVISFSGKK
KSSKKNSSSTFTALSDENALGDEILNTASSNLDSNLSKAKTEAVAETSKNKKKKKKSGRT
AQEEDDLDKILAELGEGPATSKSADPPLSSQEAKVENQPELVAPPEKEVEEESTESAAAR
KKKKKKEKEKEKKAAAAAAAAAEGNDEKIEEVKTEIIEPKKGAAKGKVVEKKVPKHVREM
QEAMARRKEEEERRKREEEEKLRKEEEERRRQEELERQAEEAKRRKKEREKEKLLRKKQE
GKLLTGKQKEEQRRLEAMRNQILSNAGALPLSTSDPSAPAKRPKYQTKKTKPAHHQTNGS
AQTKVVEHVEERIQEKDVAETEILESEKIEAVESMLVEEKSDTIEEATVDNEIQEDEDDD
EWDAKSWDDAVVDLSLKSSFADEELESESENGMKKNRKNSAPTSGGAVAKPAAPAQKSLP
SQPIKSQDIENTKKQHEVEVVDKGKRKDDAVKNRTSIPDATPKQQEENLRSPICCIMGHV
DTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAENIRERTRELKADAKLKVPGLLIID
TPGHESFTNLRSRGSGLCDLAILVVDIMHGLEPQTIESLNLLRMRNTEFIIALNKVDRLY
GWKTTRNAPILKTMKQQSKDVQNEFNMRLIQIITQFKEQGLNTELYYKNKEMGETFSIVP
TSAVTGEGIPDMLLLLVQWAQKTMTKKLTYSDEVQCTVLEVKVVEGHGTTIDVILVNGVL
HEGDQIVVCGMQGPIVTTIRALLTPHPMKELRVKGTYLHHKEIKAAQGIKITGQGLEHAI
AGTSLHVVGPEDDLEDIKDSAMEDMKSVLSRIDRSGEGVCVQASTLGSLEALLEFLKSPA
VSIPVSGISIGPVHKKDVMKASVMLEKKKEYATILAFDVKVTPEARELADELGVKIFIAD
IIYHLFDQFKAYIDNLKEEKKKEAAEEAVFPCVLKILPNCIFNKKDPIVLGVDVVEGIAK
VGTPVCIPQREFIDIGRIASIENNHKPVDYAKKGQKIAIKIVGHSSEEQQKMYGRHFDLE
DELVSHISRKSIDLLKANYRDDLSTDEWRLVVKLKNLFKIQ
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgaaagaagcctactgcacgggatgatgacggcgcccctgcggcagcccagggt
ggtgggaagtcaaagaaaaagacatttgcagtagatgacgatgagtactctattggaacc
gagttgactgaagaagcccaagatcaggaggtcaaggtcatgataacggggaagaagaaa
ggtaagaagggcaattcgaaagcttcacaacttaaagatgatgatgatgatgatgatgat
gtggatggtgtttctgaaattgttatcaccggaaagaagaagggtaagtcgaagaagggt
ggaagtagcagtgcttttactgcttccagttttggtttgcttgaggaggagggaaaggat
ggcgctaatgatgatgacgatgatgatgaatctgtgttgacagcagaaaaggatgatgat
gaagaggaagattctgtgatcaagttttcaggtaagaagaagtcgtcgaagtcttccaag
aagagtgggttttctgcagtgtcagcattcggtgcccttgatgatgagaaggacgaagat
gtaattgatgatgagaatgaagagattgatgatgagcctgttatttcatttacaggtaag
aagaagtcatcacaaggtggtaagaaggccgggaatgcatttacaggttttagtggtctt
gattatgaagatgaggacagaaatgatgataaggatgatggtgaagattttactacaatg
accttctctggtaagaaaaagaagtcctctaagggttcaaagaagagtggaaatttgttt
agtgcagcattagcagatgaggaaaatgatggtgatgattctatttcaaagccaggtaaa
ttagacattgatggtgttgatgaggacgatgtcaatgttatttcattttctggcaagaaa
aagtcctctaagaagaatagcagcagtacttttactgcattaagtgatgaaaatgcgctt
ggcgatgaaatactcaatacagcaagtagcaatcttgattctaatttatctaaagctaag
acggaagcggtggctgaaacttcaaaaaataaaaagaaaaagaagaagagcggaaggact
gctcaagaagaagatgatttggataagattcttgctgagctaggagaggggccagctaca
tcaaaatcagcagatcctcctctttcttcacaagaggctaaagttgagaaccaacctgag
cttgtagctcctcctgaaaaggaagtggaagaagaaagcacagaatctgctgcagcaagg
aagaagaaaaagaagaaggagaaagagaaggaaaaaaaggctgcagctgcggcagcagcg
gctgctgaagggaatgatgagaaaatcgaggaggtgaagaccgaaattattgaacccaaa
aaaggtgctgccaagggtaaagtggtagagaagaaagtgccaaagcatgttagggagatg
caagaggcaatggctagaagaaaggaagaagaagagcgaaggaaaagggaagaagaagag
aaattgagaaaggaagaagaagagagacgtagacaagaagaacttgaaaggcaagctgag
gaggctaagcgtaggaagaaggaaagagaaaaagagaagctcctacggaagaaacaggaa
ggcaagctgttaacagggaaacaaaaggaagaacaacggaggctggaggcaatgaggaat
cagatattatcaaatgcaggggccttacctctatctacatctgaccccagtgcaccggct
aaacgaccaaaataccagacaaagaagacaaaaccagcccaccatcaaacaaatggtagt
gcacagactaaggtagtggaacatgtagaagaaagaatacaagaaaaagatgtggcagag
actgaaatattggaatctgagaagattgaagctgttgagtcgatgcttgtggaggaaaaa
tcagatactattgaggaggctactgtagataatgaaattcaagaagacgaggatgatgat
gaatgggatgcaaagagttgggatgatgcggttgttgatctttccttaaaaagttctttt
gctgatgaggagctggagtccgaatctgagaatggcatgaaaaaaaatagaaagaatagt
gctccaacttcaggcggtgcagttgccaagccagctgcccctgcccaaaaaagtttacct
tctcagcctataaaatctcaagatattgaaaacacaaagaagcaacatgaggttgaggtt
gtggacaagggcaaaagaaaagatgatgctgttaagaacagaacttcaattccggatgct
actcctaaacaacaggaagaaaatctccgctcacccatctgttgtattatggggcatgtt
gatactggtaaaaccaagctactggactgtattcgtggtacaaatgttcaagagggagag
gcaggaggaattactcagcagattggggctacatattttcctgctgagaacattcgtgaa
agaactagggaattgaaagctgatgcaaagctgaaggttcctggcctacttattattgat
acccctgggcacgaatcgtttacaaacttgcgttctcgtggttcgggtttatgtgatctt
gcaattttggttgttgacatcatgcatggcttagagccacaaacaatagaatctcttaat
ctcttgaggatgagaaacacagaatttattattgctctgaataaggttgacagactttat
gggtggaaaacaacccgcaatgcacctatacttaagacaatgaagcagcaatccaaagat
gtgcagaatgagttcaatatgaggcttattcagattattactcaatttaaagagcaaggg
ttaaataccgagctttattataaaaataaagaaatgggggagactttcagtatagtacct
acaagtgctgttactggtgaaggtattcccgacatgttactactattggtgcagtgggcc
cagaaaaccatgacgaagaaacttacgtatagtgatgaagtgcagtgtacggtcttagag
gtcaaggttgttgaaggtcatggaacaactattgatgtcatattggttaatggtgtgctg
catgaaggagatcaaatagttgtttgtggcatgcagggcccaattgttactactattcga
gccctattgacgccccatccaatgaaggaactccgagtgaagggaacatatctacatcat
aaggaaatcaaggctgctcagggaataaaaataactggacagggtcttgagcatgccatt
gctggaaccagtcttcacgtggtaggtcctgaggatgacttggaagacattaaggattca
gcaatggaagatatgaagtcagttttgagcaggatagacaggtctggtgagggagtctgt
gttcaagcatctacacttggttccttggaagcattgttggagtttttgaagtccccggca
gtgagcattcctgttagtggaattagtataggacccgttcataaaaaggatgtcatgaaa
gctagtgtaatgcttgaaaagaaaaaagaatatgccactattttggcttttgatgttaaa
gtgactccagaagctcgagaacttgcagatgagcttggtgtgaagatttttatcgctgat
atcatctatcacttgttcgaccaattcaaggcctatatcgataatcttaaagaggaaaag
aagaaagaagctgctgaggaagcagtctttccttgtgttcttaagattttaccaaattgc
attttcaacaagaaggatccaattgtgttgggggtggatgtggttgaaggcattgccaag
gttggcacaccagtttgtattcctcaaagagaatttattgacattggtcgtattgcatct
attgaaaataatcacaaacctgttgattatgcaaagaaagggcagaagattgccattaag
atagtcgggcactcttcggaggagcagcaaaagatgtacggcaggcatttcgacttggag
gacgaactcgtcagccatatatccaggaagtccattgaccttctcaaagccaattatcgg
gatgacttgtccacggatgagtggagactggtggtaaaattgaagaaccttttcaagatt
caatga
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