KEGG   Cucurbita maxima (winter squash): 111473820
Entry
111473820         CDS       T05246                                 
Name
(RefSeq) WD-40 repeat-containing protein MSI1
  KO
K10752  histone-binding protein RBBP4
Organism
cmax  Cucurbita maxima (winter squash)
Pathway
cmax03082  ATP-dependent chromatin remodeling
cmax03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:cmax00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    111473820
   03083 Polycomb repressive complex
    111473820
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cmax03036]
    111473820
Chromosome and associated proteins [BR:cmax03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     111473820
  Histone modification proteins
   HAT complexes
    HATB complex
     111473820
   HDAC complexes
    Sin3A-HDAC complex
     111473820
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     111473820
    PRC2.2
     111473820
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     111473820
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    111473820
  Chromatin remodeling factors
   NuRD complex
    111473820
   NuRF complex
    111473820
   NuRF complex (fruit fly)
    111473820
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_THOC3 WD40 CAF1C_H4-bd Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_RIG_2nd DSE1_N Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_Aladin EIF3I Beta-prop_WDR3_2nd WD40_RFWD3 Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_RIG_1st WD_LRWD1 eIF2A Beta-prop_NOL10_N MIOS_WD40 Beta-prop_HPS5 Beta-prop_WDR41 NBCH_WD40 Beta-prop_WDR19_1st WD40_MABP1-WDR62_1st Beta-prop_NUP159_NUP214 YDMC Phage_CRI
Other DBs
NCBI-GeneID: 111473820
NCBI-ProteinID: XP_022974971
UniProt: A0A6J1ICW4
LinkDB
Position
Unknown
AA seq 423 aa
MGKDDEEMRGEMEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKD
YSVQKMILGTHTSENEPNYLMLAQVQLPLEDSENDARHYDDDRADAGGFGCANGKVQIIQ
QINHDGEVNRARYMPQNPFIIATKTVSAEVFVFDYSKHPSKPPLDGTCNPDLRLRGHNTE
GYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKTLEAMQIFKVHEGVVEDVAWHLRHE
YLFGSVGDDQYLLIWDLRTPTVNKPVQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKL
FDLRKISSALHTFDCHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAE
DGPPELLFIHGGHTSKISDFSWNPCEDWVVASVAEDNILQIWQMAENIYHDEDDLPEEPP
KAS
NT seq 1272 nt   +upstreamnt  +downstreamnt
atggggaaggatgatgaggagatgcgtggagaaatggaggagaggttgataaacgaggaa
tacaagatttggaagaagaatactccgtttctttacgatttggtcattactcatgcccta
gagtggccttcacttaccgtcgagtggttgccggacagggaggagcctccggggaaggat
tactccgttcagaagatgattttggggactcatacatccgagaatgagccgaattacctc
atgctcgctcaggttcagcttccgcttgaggattctgagaacgatgcgcgacattacgat
gacgaccgtgctgatgcgggtggctttggatgtgcgaacggaaaggtacaaataatccag
caaataaatcacgatggtgaagtcaatagagcacgttatatgcctcagaatccatttatt
attgccacaaagactgtcagcgcggaagtctttgttttcgactatagtaaacacccatcc
aaaccacctctagatggtacgtgtaatcccgacttgaggttgaggggtcacaatactgaa
ggctatggtttatcgtggagtaagttcaagcagggccatttacttagtggctctgatgat
gcacagatttgtttatgggacattaatgcaactccgaagaacaaaacccttgaagctatg
caaatttttaaggttcatgaaggtgttgtggaagatgtcgcatggcatctgaggcatgaa
tacttatttggttcagtaggcgacgaccaatacctactaatatgggatctgcgaactcct
actgttaataagcctgtacagtccgtagttgctcatcaaagtgaggtcaattgcttggca
ttcaatccctttaatgagtgggtggtagccactgggtcaactgataaaacggttaagttg
ttcgatctacgtaagatcagctctgcactccatacctttgactgtcacaaggaggaggtt
ttccaggttggctggaatccaaagaatgaaacaatcttagcttcttgttgtcttggtaga
agactcatggtttgggaccttagcaggattgatgaggagcagacgcccgaggatgcggaa
gatggcccaccggagttgctgttcattcatggcggtcataccagtaaaatatcagacttc
tcttggaatccctgtgaggactgggtggttgctagtgtagctgaagataacatactccaa
atctggcagatggctgagaacatctaccatgatgaagatgatttgccagaggaacctcca
aaggcctcttag

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