Cucurbita maxima (winter squash): 111474058
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Entry
111474058 CDS
T05246
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC111474058
KO
K24155
rabconnectin-3a
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
111474058
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmax04131
]
111474058
Membrane trafficking [BR:
cmax04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
111474058
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
111474058
RAVE complex
111474058
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rav1p_C
WD40
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_EML_2
WDR55
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_WDR36-Utp21_1st
EIF3I
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
WD40_Gbeta
WD40_MABP1-WDR62_2nd
Tuberin
Motif
Other DBs
NCBI-GeneID:
111474058
NCBI-ProteinID:
XP_022975085
UniProt:
A0A6J1IFR3
LinkDB
All DBs
Position
Unknown
AA seq
2513 aa
AA seq
DB search
MAGTASEIDSIYRLPLPLLGSEPIPSAPNRFAGSPIDWIPDFAGYAWVAYGASSVLVISH
FPSPLSPQETTIGPIFRQVLELSGDDLSVVNAVSWSPVLPSEGELAAAVGNRIWVFSHDL
GASRGSFCWRQNSVLLQSLKVEAIQWTAAGDGIIAGGVEVVLWKNTNRSWEIAWKFKPDV
PQTLVSASWSTEGPFATASQARISKMDNMFIDKACQSVLVSQSEGEYGHVKSELCHPLPI
TMIQWRTSIKEKGSSKNTPRHVLLTCCLDGTVRLWSETENGKVKKFSKDVNKKSLRRRFS
VTAVIEVNQALNGTLGTDLFVTWATEIRGMCKPFELTKKVFSEGFEHNRAGSCEWLISLG
PGSLVTFWAVHCLDDVSPLRFPRVTLWKKQEVHCLDDVSPLRFPRVTLWKKQELKGLEVG
RHYIDGCTNLSNKFLLKKVVISRIYPSGSPSMCSLIQLLPCNSLVWSILSSQTSTDVGDV
SFDKKRSDNFFSRSVTTQLNLSGHAGKILHVAVHPYNCEVKVAASLDSNGLLLFWSLSSI
STCVLGPPTLNHTWELCGKLVTQDSCSKYTSVQWAPSILDEELILLMGHARGIDFFAVRI
SQNDGENTECHYLCTIPFTGHGPFENGPTDIFSISLPSDCNTTYKFNKFMLIGVWXMEGF
QALSWEITLHTYDIFGTGVHCNCDIDNENIAELSILTFESSFGSKKYCVSIIPCSSQFPN
SQINDQITSFGVVHQGTFAPVQQKLTSSGEPYTPAYIMATGSADGSLKLWRSNVGKPSIF
HVSWELVCVVVTHQGPITALCLTDCGRKIATISKNNHKPNISNVHLWELACLGAGTLLFE
DELSFESNIIAVDWLTLGNGQFLLGICLQNELRVYSLKHFGQTLSGITKSLDTETWICIG
FARTLPSNCGFLWGPKSTAIVIHDHYFCIVSPWLFLGDKNHDAMCSPYYIGETKNHHVNG
TDVAVFADECCSIRKLSDDNYDSKRRPRSLTNIHAETNILSNSSYPRVAQMKSTTSLGLI
SMPDIADKLCGSLSSFHPHALLIDIYSGKWKRAYSALSHLIEHLSSNKKSSANPTNTIPE
ILLSDYFEGVAKTSTDKEVQWSMNGLASQFKEGVSPWTFNWDSISNDSSFIPSSTKSEFS
SFIEPLEKFYESAGLTSMEKTETLAIIDLLDEISNKSSASAYESLDEPGRRYWIALRFQQ
LRFLRCDGRSASLEELTIDSRLIGWAYHSDCQQNLLDSVISKEPTWQEMRSLGVGIWFTN
TTQLRARMEKLARSQYLKKKDPKDCMLLYVTLNRIQVLAGLFKISRDEKDKPLVGFLSRN
FQEEKNKAAALKNAYVLMGKHQLELAVAFFLLGGDTSSAIRVCAKNLGDEQLALVISRLV
EGRGGPLQQHLITQFMLPSAIEKGDTWLASILEWELGNYSQSFLNVLGLESESNSVTGIP
FLSSRHISLQDPSVGLYCLLLATKNSMKKAVGEQSAEVLCRLATLMTATALNRCGLPLEA
LEQMSTCGSITEVPDGTNGVDILCFETIRKICKQSPRDSSSWVSVEFAVHLEYRAKLDLA
VQYFSKLIRKHPSWPTINLESVGCMGCLKEYEMDYEKSLESFQRKLNVGFAQFEMKFSLL
PASLVSMMLVFLCNVGLQFIGYDIFHGFASQECPDDKNQKIYTFLLHPLVHKSLLKTAQE
ILFSASRYTIACSLSFHKGETGSKCFDTWWYYLQGLLLSLQGLRAALRITHGSLKDDLVS
KLHVLKMLQPLLENARSPHDIDVEHLKLLLPQIGELIAQNLLTDVDYNHQILEGMPNEQS
DDIVHLIPGDERWHIIGAVLWHHMSKFMKHKLITLTNTSKEGSLSSMILGNLDTWAQSLS
TIKSDWKAISKDVIELVSMSLTALLTIVLAQVSSYQLKQLVSSLQYKLDQKLYVATAVWF
EQICQSLSSHDKGHTDEMYNMDMCIKGEFETLWNITSNPNLISDCFAHEKVHMLHCFDRK
LSERWSEIYNGITRAERNCTHEAAHISRSVSDATGSPGKLLRNGKTLVRSDKELATLDDA
MPFQKPKEICRRNGELLEALCINSVDQRQAAVASNKKGIIFVSWEDGMASRDEEDYIWSN
SEWPLNKWGAASESTPAPTCVFPGVGLGSSKGAHLGLGGATLGVGSSVRPGRDLTGGGAF
GISGYAGVGASGLGWETQEDFEEFVDPPATAEHTSTRAFSSHPSRPLFLVGSTNTHVYLW
EFGKNRATATYGVLPAANVPPPYALASISSVQFDQCGHRFATAALDGTVCSWQLEVGGRS
NVRPTESSLCFNGHASDVTYVTSSGSIIAVAGYSSTAVNVVIWDTLAPPKTSQAAIMCHE
GGARSISVFDNEIGTGSVSPLIVTGGKGGDVAIHDFRYVVTGRTKKQKNCSKDERISDAS
NSDMPSTVGEQNLNGMLWYIPKAHSGSVTKISSIPNTSLFLTGSKDGDVKLWDAKRAKLV
HHWPKLHDRHTFLQPSSRGFGEVVRAAVTDIQVISSGFLTCGGDGLVKLVQFG
NT seq
7542 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaacggcctcggagatcgattctatctatcgtctccctctccctcttttagga
tccgagccgatcccttccgccccgaatagattcgctggttcccccatcgactggattcca
gattttgctggctatgcatgggtcgcttatggagcctcatccgttttggtgatttctcac
ttcccttctcctctgtctccccaagaaaccacaattggacccatatttcgccaggtactg
gagctctctggcgacgacttatctgttgtcaatgccgtatcttggtctcccgtattaccg
tcggagggcgagctcgctgcagctgtgggcaaccggatatgggtgttttctcatgatttg
ggtgcttctcgaggttctttttgttggaggcagaattccgtgcttctgcaatccttgaag
gttgaggccattcagtggacagctgcaggagatggaattattgctggtggagtagaggtt
gttttgtggaagaacactaacaggtcctgggaaattgcttggaagttcaaaccggatgta
ccccaaactcttgtttccgcaagctggtctaccgagggaccatttgcaacggcatctcaa
gcaaggatatcgaagatggataacatgtttattgataaagcttgccaatctgtgctggtc
agtcagagtgaaggggagtatggacatgtgaagagcgagttatgccatcctctacctata
actatgattcaatggaggacttcaattaaagagaaaggaagttccaagaatacaccaaga
catgtgcttctgacatgctgcttggatggaactgtgagactgtggagtgagactgaaaat
ggaaaagtaaaaaaatttagtaaggatgtaaataagaagtcattgagaaggcgtttttct
gttactgctgtcattgaggtaaatcaggcattgaatggaactcttggcacggatttattt
gtaacatgggcaaccgagattagaggtatgtgcaaaccttttgaattaactaagaaagtt
ttctcagaaggattcgaacacaacagggctggaagctgtgagtggctaataagtttaggt
ccgggatcattggttactttttgggctgtccattgtcttgatgacgtatccccattaaga
ttccctcgagtcacattgtggaagaagcaagaggtccattgtcttgatgacgtatcccca
ttaagattccctcgagtcacattgtggaagaagcaagagctcaaaggacttgaagttgga
cggcattatattgatggttgtacaaacttaagtaacaagtttctcctcaagaaagttgtt
atctcaaggatttatccgtctggttccccaagtatgtgttctttgattcagttattgcct
tgtaattccttggtgtggtcaattttatcttctcagacatctactgacgtaggggatgta
tcctttgacaagaaaaggtcagacaatttcttctctcgttcagttactacccaattgaat
ttaagtggtcatgctggaaaaatcttacacgttgctgtacatccatacaactgtgaggtc
aaagtagctgcttctttggactctaatggcttgcttcttttctggtcactatctagtatc
tccacctgtgtattaggccctccaacacttaatcatacctgggaactttgtggaaaactt
gtaactcaagattcatgctcaaaatatacaagtgtgcagtgggcaccatcaatattggat
gaagaactgattcttctgatgggacatgcgagaggaattgatttttttgctgttaggatt
agccaaaatgatggagaaaatactgaatgtcactacttatgtaccatacctttcactggt
catggtccttttgagaatggtccaactgatatattttccatttctttgccttctgattgt
aatacaacatataaattcaataaatttatgttaataggggtatggnnaatggaaggattt
caggcactatcatgggaaatcaccttacatacttatgatatctttgggactggagtacat
tgcaattgtgatattgataatgaaaatatagctgagctcagtatattgacatttgaaagt
tcttttggaagcaaaaagtattgtgttagtataatcccctgctcatcacagttcccaaat
tctcaaattaatgaccagattacaagttttggcgtggtgcaccaaggaacttttgctcct
gtgcagcaaaaattaacttcttcaggtgaaccatatacccctgcatatattatggctact
ggctctgctgatggaagtttgaaactttggagaagcaatgtaggcaaaccatcaatcttt
cacgtgtcttgggagcttgtttgtgttgttgtcactcaccaaggccccattactgcattg
tgtttgaccgattgtggacggaaaattgctacaattagcaagaacaaccataaacctaat
atcagcaacgttcacttatgggagcttgcatgccttggtgcagggacccttttgtttgaa
gatgaactgtcctttgaaagcaatatcattgcagtagactggttaactttaggaaatggt
cagtttttacttggaatttgtttgcaaaatgaattgcgtgtgtactccctgaagcatttt
ggtcagaccttgtcaggcatcacaaaatctttggatactgagacttggatctgcattggg
tttgctcgtactttaccatctaattgtggcttcctctgggggccgaagagcacagcaata
gttatacatgatcattacttttgtatagttagtccttggctgttccttggggataaaaac
catgatgctatgtgcagcccttattacattggagaaactaaaaatcaccatgtcaatggg
actgatgtcgctgtttttgctgatgaatgttgcagtatcagaaaattatcagatgataat
tatgacagcaaacgtagaccaagatctctcacaaacattcatgctgaaaccaatattcta
tcgaatagttcatatccacgggttgcacagatgaaaagtacaacttcgcttggtcttata
agcatgcctgatatagctgataaattatgtggatcactgtcctcttttcatcctcatgct
ctcctcattgatatatattcaggtaagtggaaacgtgcatattcagctttgagtcatctt
attgagcatctttcttctaataaaaagagttctgcaaacccaaccaatactattccggag
atccttttgtcagattattttgaaggagttgcgaaaacttctactgataaagaagttcag
tggagtatgaatggcttagcatcccaatttaaggaaggtgtttcaccatggaccttcaat
tgggattctattagtaatgacagctcattcattccgtcctctacgaaatctgaattcagc
tcctttattgagcctcttgaaaagttctatgaatcagcagggctaaccagcatggagaag
acagaaactctagcaattatagatcttcttgatgaaatcagtaataaatcttctgcatct
gcctacgaaagtcttgatgagcccgggagaagatattggattgctttgaggtttcaacaa
ctgcgatttcttcggtgtgatggtagatcagcatctctggaagagctgaccattgattca
agattgattggatgggcctatcactctgattgtcagcaaaatctattggattcggttatc
tctaaagaaccaacatggcaggaaatgagaagtttgggtgttggaatttggtttactaat
acaacacagttgcgtgcaaggatggagaaactggcgagatcccaatatctgaagaaaaaa
gatcccaaggattgtatgcttctgtatgtcacactgaatagaatccaagttttagctggc
ctttttaaaattagcagggatgagaaggataaacccttggtgggatttctttcacgcaat
tttcaggaggagaaaaataaggcagcagctttgaagaatgcctatgttttaatggggaaa
catcaactggaattggctgttgctttttttttgcttggtggtgatacttcttctgctatc
agagtctgtgcgaaaaatcttggggatgagcagcttgcactggtaattagtcgtttagtt
gaagggcgtggtggacctcttcagcaacatctaataacacagttcatgcttccatctgcc
attgagaagggtgatacctggcttgcaagcattcttgagtgggaattaggaaactactct
caatctttcctgaacgtgcttggtttggagtcagagtcaaattctgttactgggataccg
tttctttcaagtagacatatttctttacaagacccaagcgttggtttgtattgtctattg
ttagcaaccaaaaatagcatgaagaaagcagttggggagcaatctgctgaggtcctttgt
cggcttgcaaccttgatgacggctactgctttaaacagatgtggtcttcctcttgaagct
ttggaacaaatgtcaacctgtggaagcattactgaagttccagatgggactaatggggtt
gatattctgtgctttgagactataagaaaaatctgtaagcaatcgcccagagattcctcc
agttgggtttctgttgaatttgcagtccatctggagtatcgagcaaaattggatttggca
gttcaatacttctcaaaattgataaggaagcatccaagctggccaactataaatttagaa
tctgttggatgcatgggttgcttgaaggaatatgagatggattatgagaaatctcttgaa
agttttcagcgtaagttaaatgtagggtttgcacagtttgaaatgaagttctcgttgctt
cctgcctctcttgttagtatgatgttggtctttctgtgtaatgttgggctacaatttatt
ggatatgacatatttcatggatttgcttctcaagaatgcccggatgacaagaaccagaag
atttatactttcctcttgcatcctctcgtgcacaagtcactactcaaaacagcacaagaa
attttattttcagcttcacggtacactattgcttgcagtttatcttttcacaaaggtgaa
acagggtcaaaatgtttcgatacttggtggtactaccttcaaggtctcttactatcctta
cagggtttaagagctgctttgagaattacacatggttctctcaaagacgatcttgtttcc
aagctccatgtccttaagatgctgcaaccactcttggaaaatgcacgatctcctcatgac
attgacgtggagcatctgaagctactcctccctcagattggagagttgatagctcaaaat
ttattgaccgatgtagattataaccatcagattttggaaggcatgcctaatgaacaaagt
gatgacattgtgcatttaattccaggagatgaaagatggcacattattggggctgttttg
tggcatcacatgtccaaattcatgaaacataagttgattactttaactaatacatctaag
gagggtagcttgagcagtatgattcttgggaaccttgatacatgggctcaaagtctttca
accattaaatctgattggaaagccatttcaaaggatgtgattgaattggtatcaatgagt
cttactgctctactgactatcgtccttgctcaggtttcttcttatcaactaaaacaattg
gtatcatctctgcaatataaattagatcagaagctgtacgtggcaactgctgtttggttt
gaacagatttgccagtctctatctagtcatgacaagggccatactgatgagatgtacaat
atggatatgtgtatcaaaggtgaatttgaaacattatggaacattacttccaatcccaat
ctaatatcagactgctttgcacatgaaaaggttcatatgttgcattgttttgatcgtaaa
ctctctgaaagatggagtgagatttacaatggcatcacaagggcagagcgcaattgtact
catgaagctgcacatattagtaggtctgtcagtgatgccactggatcacctggtaaatta
cttcgtaatgggaaaactcttgtcagatctgacaaggaattggccacccttgatgatgcc
atgccttttcagaaacctaaagagatatgtaggaggaatggagagcttttagaggctttg
tgtatcaactctgttgatcaaagacaagctgcagttgccagcaataaaaagggtataatt
tttgttagctgggaagatgggatggcctccagagatgaagaggattatatctggtcaaac
tctgagtggcctctaaataaatggggggcagcctctgaatcaacaccagctccaacgtgt
gtatttcctggtgttggtcttgggagcagcaaaggggcacaccttgggttaggtggtgct
actctgggtgtaggatcatctgtaaggcctgggagagatttgactggaggtggagcattt
ggtatttcgggttatgcaggtgttggtgcttctggcttaggttgggaaacacaagaggat
ttcgaggaatttgtagaccctccagctacagcagaacacacaagtacgagggctttctcc
agtcatccttctagacctcttttcttggttggctctaccaatacacatgtatacttgtgg
gagttcgggaagaacagagctactgcaacatatggtgtcttgcctgcagcaaatgtgcct
ccaccatacgctctagcctcaatatcatctgtgcagtttgaccaatgtggacacagattt
gctactgctgcattagatgggaccgtatgctcatggcagttggaggttggaggaagaagc
aatgtccgtccaaccgaatcttctttatgctttaatggccatgcatcggatgtcacttat
gttacttccagtggatcaataatagctgtggctggatatagctccaccgcagttaatgtg
gtcatatgggatacactggctccacctaaaacttcccaagcagccattatgtgtcacgaa
ggtggtgctcgctctatttctgtgtttgataatgaaatagggaccggttctgtttctccc
ctcatagttactggtggcaaaggtggagacgtggcaattcatgacttccgatacgtagtc
actggtaggactaagaaacaaaaaaactgttcaaaagatgaaaggattagcgatgcttcg
aattctgacatgccgagtacagttggtgaacaaaacttaaatggaatgctttggtacata
ccgaaggctcactctgggagtgtcactaaaatatcttctatcccaaacacaagtttgttc
ttgaccggaagtaaagatggagacgtaaaactttgggatgcaaaaagagctaaattagtg
catcattggccaaagttgcatgatagacacacttttctgcaaccaagttcccgaggtttc
ggtgaagtagttcgggccgctgttactgatatacaagttatctcaagtggatttcttacc
tgtggtggagatggcttggtaaagctggttcagtttggatga
DBGET
integrated database retrieval system
