Cucurbita maxima (winter squash): 111474290
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Entry
111474290 CDS
T05246
Name
(RefSeq) RNA-binding protein 28 isoform X1
KO
K14573
nucleolar protein 4
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
111474290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cmax03009
]
111474290
Ribosome biogenesis [BR:
cmax03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
111474290
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
111474290
NCBI-ProteinID:
XP_022975200
UniProt:
A0A6J1IG31
LinkDB
All DBs
Position
Unknown
AA seq
985 aa
AA seq
DB search
MGKNKRFKDGGEKGAAAGDHCPSKVFVKNLPYSFTNSQLEETFSDVGPVRRCFMVTQRGS
TEHRGYGFVQFAVAEDANQAIQQKNGLSIEGRKITVKHAMHRAPLEQRRSKENQGIASKS
KTNKEGDTSEREEQTTNEDGDTSKREEQTTNEDGDTSEKEEQTTNEDGDISKREEQTTLN
SEGRKERHLNAQKLAPLSSYLEDKEGSSGKQRIARTVVVGGLLNADMAEDVHRQAKEVGA
VCSIVYPLPRKEVEQHGLLRDGCKMDVSAVLFASVKSARAAVTILHQKEMQGGVVWARQL
GGEGSKTQKWKLIVRNLPFQAKEKEIKDTFSSAGFVWDVMVPHSSDTGLSKGFAFVKFTC
KQDAENAIKKFNGQKFGKRTIAVDWAIPKKIYSSGANAPVDSDEGEETEKDREGSISSDD
LEVENAAVHNKSQRSDKDEGSSEDSEKEDISSEIDFEGEAEISRKVLENLIASSAKEALP
SLIDGNPPSKVNKEPVLDSSKKSSDMSDKVSNGPEKLSEGKTSILKPVDEEDLKRTVYIG
NLPFDINNEEVKQRFSGFGEVLSFVPVLHQVTKRPRGTGFLKFKTADAATAAVSSANVAS
GVGIFLKGRQLKVLNALDKKSANEKELEKSKNDNLDHRNLNLAQEGIILEGTPAAEGVSA
SDMMKRQRLEKKRMTKLQSPNFHVSRTRLVIHNLPKSMKEKELQKLCIEAVTSRATKQKP
VIRQIKFLKDVKKGKVLTKNYSCGVAFVEFSEHQHALVALRVLNNNPETFGPVNRPIVEF
AVDNVQMLKLRKAKLQASYQDNTANVPKALHRNADTNAGDIHSNKTNSRKRKATGDNRPV
KEKNRNENKNGDHVSNDMAMEESRARKKRKTRPESGNINESQKQKPEGRRSMPEKLSKRS
APMDTVKTKASQEADVQHKKKAKHQVEQQQQRKRAKKNKLPVGQDAVDKLDKLIEQYRSK
FSQKSSDPADGEKKGSKQVRRWFQS
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaacaagaggtttaaggacggtggcgagaagggagccgccgccggcgatcac
tgcccttccaaggtttttgtcaagaacttgccgtactcgttcactaactcacagctagaa
gaaacattcagtgatgttggaccggtccggcggtgcttcatggttacgcagaggggttca
actgagcatcgtggttacggattcgtgcagtttgctgtagcagaagatgcgaatcaagca
attcagcagaagaatgggctgtctattgaaggacgcaaaattactgttaaacatgcaatg
catcgagctccccttgagcagcggcggtcaaaagaaaatcaaggtattgcatctaagtca
aaaactaacaaggaaggagatacttctgaaagggaagaacaaacaactaacgaggatgga
gatacttctaaaagggaagaacaaacaactaacgaggatggagatacttctgaaaaggaa
gaacaaacaactaacgaggatggagatatttctaaaagggaagaacaaacaactttaaat
tctgaggggaggaaagagagacatttgaatgctcagaaattggctccactttctagttat
ctagaggataaagagggttcttcaggaaagcaaaggattgcaaggactgttgtagtcggt
ggtcttcttaatgctgatatggctgaagatgttcaccgccaagctaaagaagttggtgct
gtatgctctattgtttatcctctgcccagaaaagaagttgaacagcatggccttttacga
gatggatgcaaaatggatgtttcagctgtactttttgctagtgttaagtctgcacgtgct
gctgtgaccatattacatcagaaagagatgcaaggaggtgttgtgtgggcccgccaactg
ggtggggaggggtccaaaactcagaaatggaaacttattgttagaaatcttccatttcag
gccaaagagaaagaaataaaggataccttttcatctgcaggatttgtgtgggatgtgatg
gtgccacatagttcagacacaggattatcgaagggttttgcgtttgtcaaatttacatgc
aagcaggatgctgaaaatgctattaaaaagttcaatggtcaaaaatttggtaaaaggaca
atagctgtggactgggccattccgaagaagatatatagttcaggtgctaatgctccagtt
gattcagatgaaggggaagagactgaaaaagacagagaaggtagcattagtagtgatgat
ttggaagttgaaaatgctgctgttcataacaaatctcagcgctccgacaaagatgaaggt
tcttcagaggattcggagaaagaagatatttcctcggagattgattttgaaggagaagca
gaaatttcaagaaaagtacttgaaaatctaattgcatcttcggctaaagaagctcttcct
tctctcattgatggtaacccaccatctaaagtgaacaaggagccagttctcgattcatca
aagaagtcatctgatatgtctgataaagtatcaaatgggcccgaaaagttaagtgaaggc
aaaacatctattcttaagccagtagatgaagaggatttgaagagaacagtttatataggc
aatcttccatttgatattaataatgaagaagtgaaacagcggttttctggattcggtgaa
gtactatccttcgtaccagtccttcatcaagttacaaaacgtcctagaggcactggtttt
ctcaagtttaaaacggctgatgctgctactgctgctgtttcatctgcgaatgttgcatct
ggtgtgggaatatttctgaaaggcaggcaattgaaagtattgaatgctctagataagaaa
tcagctaatgaaaaggaattggagaagtcaaaaaatgacaaccttgaccaccgaaatctt
aaccttgcacaggaaggtattattctcgagggaactccagctgctgagggtgtttctgct
agtgatatgatgaaacgtcaaaggctagaaaagaaacgaatgactaagcttcagtctccg
aattttcatgtttcaagaactaggctcgttatacacaatttaccaaaatcaatgaaagaa
aaggaacttcaaaaactttgcatcgaagctgttacctcgcgagctacaaagcaaaaacct
gtgattcgccagattaaattcttgaaggatgtgaagaaaggaaaggtcttgacaaaaaat
tactcttgtggagttgctttcgtcgagttttctgagcatcagcacgcccttgtagccctg
cgagttctcaacaacaatccagaaacttttggccctgtgaatcgcccgatcgtagaattc
gctgtagacaacgttcagatgttgaagctacggaaagcaaagttacaagcttcgtatcag
gacaatactgccaacgttcccaaagcactgcatcgtaatgctgatacaaatgctggggat
atacattcaaacaagacgaactccagaaaaaggaaagcaacaggcgataatcgtccagta
aaggagaaaaatcgcaacgaaaacaaaaatggcgatcatgtatccaatgatatggcgatg
gaagaaagtagagctagaaaaaagaggaaaacgcgtccagaaagtggtaatataaatgag
tcacagaaacaaaaaccagaaggacgaagatcaatgcctgaaaaattgagcaagagatcg
gcacccatggatactgtgaaaacaaaagcttctcaggaagctgatgtacaacacaaaaag
aaggcaaaacatcaagtagagcagcagcagcagaggaagagggcaaagaaaaacaagtta
ccagtaggacaggatgccgttgataaactcgataaacttatcgaacaatatcgatccaag
ttctcgcagaagagttcggatccagcagatggtgaaaagaaaggctctaaacaggttaga
agatggttccaatcataa
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