Cucurbita maxima (winter squash): 111474372
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Entry
111474372 CDS
T05246
Name
(RefSeq) pre-mRNA cleavage factor Im 25 kDa subunit 2-like isoform X1
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111474372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmax03019
]
111474372
Messenger RNA biogenesis [BR:
cmax03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
111474372
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
111474372
NCBI-ProteinID:
XP_022975252
UniProt:
A0A6J1IEE3
LinkDB
All DBs
Position
Unknown
AA seq
200 aa
AA seq
DB search
MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHK
HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALQPDWQIGECVAIWW
RPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG
PVISTIPQQLSRFQFNMITT
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggtgacgtcgccggtggtgaacacctatccactttccagctacaccttcggtactaaa
gagccgaagctcgagaaggacacctccgtcgccgatcgtcttgctcgcatgaaagtcaac
tatatgaaggagggcatgaggacgagtgttgaagcaattcttctggtgcaagaacataag
catccccatattctacttctgcaaattggaaataccttttgcaagctccctggtggccgg
ttgaagccaggagaaaatgaaattgaaggtttaaagaggaaactgacgagcaaactgggt
gcaaattcaccagccctccagcctgattggcagattggggaatgtgtggctatttggtgg
agaccaaactttgaaactgttatgtatccttattgcccccctcatataacgaaaccaaag
gaatgcaaaaagcttttcattgttcacttgtctgagagagagtacttcgcagttcctaaa
aatttgaagctgcttgcagttcctttgtttgaactctatgacaatgttcagagatacgga
cctgttatatcgacgatcccgcagcagctttccaggtttcagttcaacatgatcaccaca
tga
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