Cucurbita maxima (winter squash): 111474552
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Entry
111474552 CDS
T05246
Name
(RefSeq) SWI/SNF complex subunit SWI3B
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111474552
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmax03021
]
111474552
03036 Chromosome and associated proteins [BR:
cmax03036
]
111474552
Transcription machinery [BR:
cmax03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
111474552
Chromosome and associated proteins [BR:
cmax03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
111474552
PBAF complex
111474552
GBAF(ncBAF) complex
111474552
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
SWIRM-assoc_1
Myb_DNA-bind_6
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
111474552
NCBI-ProteinID:
XP_022975356
UniProt:
A0A6J1IDY0
LinkDB
All DBs
Position
Unknown
AA seq
502 aa
AA seq
DB search
MAANLPVQDPPTDASAKQPTPSPSPTLVTPPVKIDTPSSDSGKTPAAVPASTPRPEDLPQ
SASPDPVHLPSYSRWFSWNGIHECEVRFLPEFFNSRSPSKNPRVYKYLRNAIVKNFRECP
SKKITFTDVRKTLVADVGSIRRVFDFLEAWGLVNYSPSVLNKPLKWEDRDSKSNSSASHT
GEPGGSSADSSAPKDASKRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGVSSSD
FRRVEINDETRTDWTDKETLHLLEALTHHGDDWKKVAQHVGGRTERECVAHFVKLPLGEQ
FLGYPDSGNVGGRTVVKDHASADLTLESTPLTSKRIRLSPLADASNPIMAQAAFLSSLVG
VEVAEAAAHAAVVKLSDMGFGGDGEIATAVARNIGDQGNDVVSCGGSTARSSFSVSSVDA
NSQIEKEEVAVEKAISHILDVQMKEAVDKLDRLEEVDLQMEKEFKQLDQMKSMLFVDQLN
LLFHKGYIPTIEDKNSKNLSTY
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggcggctaatttaccggtccaagatccccccacggatgcttctgccaaacaacctacg
ccttcgccctcccccactcttgtaacccctcccgttaagatcgacactccttcatctgac
tccggcaagacccccgccgccgttcccgcttccacccctcgccctgaggacctccctcaa
tccgcctctcccgatccagttcatcttcccagctactccagatggttctcctggaacggc
attcacgagtgcgaagttcggttccttccggagttcttcaattcacggtcgccctctaaa
aaccctagggtttacaagtaccttcgaaatgctattgtcaagaatttcagagaatgccct
tccaagaagatcacatttactgatgtccgaaagacgctcgttgccgatgtaggatctatt
cgtagggttttcgattttctcgaggcttggggtctcgtcaattactcgccgtccgtcctg
aacaaaccgctcaagtgggaggaccgggactcgaagtctaattcgtccgcttcgcacacc
ggtgaacctggaggtagttccgcagattcttcagctcctaaagacgcttctaagagagta
tgcagtggttgcaagtctatttgtagcatcgcctgctttgcatgcgataagtttgatttg
acgctttgtgcgaggtgctatgttcgtggaaactatcgagttggtgttagttcttcagat
tttcgacgtgttgagatcaatgatgagacacgaacagattggactgataaggagactttg
catcttcttgaagctttgacgcatcatggtgatgattggaaaaaggtcgcacaacatgtt
ggtggcagaactgaaagggaatgtgttgcccattttgtgaagcttcctttgggggagcag
tttcttggttatccagattccggaaatgttggtggcagaactgtagtgaaggatcatgcc
agtgccgatcttacattagaaagtacacctcttactagtaaaagaatccgtctatctcct
ctggcagatgcaagtaatcccataatggctcaggctgcctttttgtcatctttggtgggt
gttgaggtagcagaagcagctgcccatgcagctgtggttaaactttctgatatgggcttt
ggaggagatggggaaattgccacagctgtcgctaggaatataggagaccaaggaaacgac
gttgtatcctgtggaggcagcactgctaggagctcatttagtgtgtcttcggtggatgca
aactcacagattgagaaagaagaggtggctgtggagaaagcaatatctcatatactagac
gtccaaatgaaagaggctgtagataagcttgatcgtctggaggaggtagacttgcagatg
gagaaggaatttaagcaattagaccaaatgaaaagcatgctttttgttgatcaactgaat
ctcttattccacaaaggatatatccctaccatcgaagacaagaacagtaagaatctaagt
acttattga
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