Cucurbita maxima (winter squash): 111474906
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Entry
111474906 CDS
T05246
Name
(RefSeq) replication factor C subunit 3-like
KO
K10756
replication factor C subunit 3/5
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03030
DNA replication
cmax03410
Base excision repair
cmax03420
Nucleotide excision repair
cmax03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
111474906
03410 Base excision repair
111474906
03420 Nucleotide excision repair
111474906
03430 Mismatch repair
111474906
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmax03032
]
111474906
03036 Chromosome and associated proteins [BR:
cmax03036
]
111474906
03400 DNA repair and recombination proteins [BR:
cmax03400
]
111474906
DNA replication proteins [BR:
cmax03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
111474906
DNA Replication Termination Factors
ELG1-RFC complex
111474906
Chromosome and associated proteins [BR:
cmax03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
111474906
DNA repair and recombination proteins [BR:
cmax03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
111474906
Check point factors
HRAD17(Rad24)-RFC complex
111474906
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RCF1-5-like_lid
RFC_C
RuvB_N
UBN_AB
COMPASS-Shg1
Rad17
AAA_22
nSTAND3
FAZ1_cons
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
111474906
NCBI-ProteinID:
XP_022975501
UniProt:
A0A6J1IEE5
LinkDB
All DBs
Position
Unknown
AA seq
607 aa
AA seq
DB search
MAATQQQPNFSSSSSLRRSLSDSNTRRRQRRHWSISTASSSSKSSWSTKLAKLLARLNLF
SRNSDLTEESLQAHNERIDDLDKTPLKSSPYYRGLTDSSLAINYHHGPLTTTHVTTGPHH
YASSTTTAQTQTSLSYAVVSKLKEWAPCLIGKPNKKPPAHHQHETPTTTTVVGKTTSLAT
SSSPEKIERLATEKEEKLLRERLVMYGRREGRSGVGVDGGGEASEKEKEKERYTWGDKYR
PKVLEDFICNRQTACELKKVVEEKGCGHYIFEGPPGVGKRTMIQAMLRQAFGEQAMEVKE
VGRVFALKSEMVGSIEVKVKESSHCVEVNLSQTKGFEKQVIDQLIKETQSPLPCNHARCR
GILLCEADQLSNETLMYVKWAIERNKGCSKIFFCCSDVSKLLLLSSLCTHVHLSPPSKQE
IVEVLEYIAKQQEFDLSRRMAERIADNSKNNLRQAIRSLEASWKKSRLFEEDENKLLTGW
EDDIADVAKKIVEEQSPKQLYIVRGKLKKLIEYDVSPNFIFKTLVDELKKFLDEELQRRV
ESFYADYNKMEEKPFVTDKGNGEEAVIKELHDPMRKNVNHFLKIEEFIAKFMSCYKGEAN
KNNYLPT
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggctgccacacaacaacaacccaacttctcctcctcttcctctctccgccgctccttg
tcagactccaacacgcgccgccgccaacgccgccattggagcatctccacagcctcctcc
tcctcaaaatcctcctggtccacaaagctagccaaactcctagcccgcctgaacctcttc
tcccggaactccgacttgacggaagaaagcctccaagcccacaacgaacgaatcgacgac
ctcgataaaaccccccttaaatccagcccttattaccgcggcctcactgactcctccctc
gccatcaattaccaccatggcccactcaccaccacccacgtcaccactggtccccaccac
tacgccagctcaacaaccacggcccaaactcaaacctctctctcatacgccgtcgtttcc
aaactcaaggagtgggccccatgcctcataggaaaacccaataagaagccgccagctcat
catcaacacgaaactccaacgacgacaacagttgttggtaaaacgacgtcgttggctact
tcgtcgtctccggagaagattgagcggttggcgacggagaaggaagagaagctgttgagg
gagagattagtaatgtacgggcggagagagggaaggagtggagtgggggtggacggcgga
ggggaggcgtcggagaaggagaaggagaaggaaaggtacacgtggggggataagtacagg
ccaaaagtgctggaggattttatatgcaatcggcaaacggcgtgtgagttgaagaaagtg
gtggaggagaagggttgtgggcattatatattcgaaggaccgccgggagttgggaaaagg
acgatgattcaagctatgctcagacaggctttcggtgaacaagcaatggaggttaaggaa
gttggtagagtttttgccttgaagagtgaaatggtggggagcattgaagtaaaggtgaag
gaatcatctcattgtgtggaagtcaatctctcacaaaccaaaggctttgagaaacaagtc
attgaccagctcatcaaagaaactcaatcccctttgccatgtaatcatgccagatgtcga
gggatattgttatgtgaagcagatcagctatcaaatgaaaccctaatgtatgtaaaatgg
gcaattgagaggaacaaagggtgcagcaaaatcttcttctgttgctctgatgtctctaag
cttcttcttcttagctctttatgcactcacgttcatctctccccgccttcaaagcaagag
atagtggaagttctggaatacatagcaaaacaacaagaattcgacttgtcgcgtcgaatg
gcagagagaatcgccgacaattccaagaacaacctccgacaagccattcgatcattggag
gcttcgtggaaaaaaagtcgcttgtttgaagaagatgagaataaattattgacgggttgg
gaagatgatattgcagatgttgctaagaagatcgtcgaggagcaaagcccaaaacagctg
tatattgttcgtggaaagctaaaaaagcttattgaatacgatgtctcccccaatttcatt
tttaagactctagtagacgaattaaagaagttcttggacgaagaattacagcgtcgagtc
gaaagtttctatgccgattataataaaatggaggaaaaaccatttgtcactgacaaaggc
aatggggaagaagcagtgatcaaagagttgcatgatcctatgagaaagaacgttaaccac
ttcttgaagattgaagaattcatagcaaagttcatgagctgctataagggagaagcaaat
aagaacaattatttgccgacatga
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integrated database retrieval system
