Cucurbita maxima (winter squash): 111476410
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Entry
111476410 CDS
T05246
Name
(RefSeq) vacuolar protein sorting-associated protein 35B-like isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111476410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmax04131
]
111476410
Membrane trafficking [BR:
cmax04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
111476410
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
111476410
NCBI-ProteinID:
XP_022975817
UniProt:
A0A6J1IE38
LinkDB
All DBs
Position
Unknown
AA seq
789 aa
AA seq
DB search
MLSVAIEDEEKWLAEGIAGIQHNAFYMHQAVDANNLREALKYSALMLSELRTSKLSPHRY
YELYMRAFDELRMLEIFFKDESRHGVTVVDLYELVQHAGNILPRLYLLCTVGSVYMKSKE
VPAKEILKDLVEMCRGVQHPLRGLFVRNYLAQVSRDILLDINSECEGDADTVMEAVEFVL
QNFTEMNKLWVRIQLQGPARLREKQEKERSELRDLVGKNLHVLSQIEGVDLEMYKQTVLP
RVLEQVVNCKDELSQYYLMDCIIQVFPDEYHLQTLETLLGVCPQLQATVDIRMVLSQLMD
RLSNYAVSNADVIPEFLHVEAFAKLSNAIGKVIEAQVDMPIVGAITLYVSLLSFTLRVHP
DRLDYVDQILGACVKKLSSQPKLEDTRATKQIVVLLSAPLEKYNDIVTALTLSNYPRVMD
HLDNATNKVMAMVIIQSIMKNNSCISTADKVDVLFELIKGLIKDLEEVTVDELDEEDFKE
EQNSVARLLHMLHNDDPVEMLEIICAVKKHILCGGPNRLPFTVPPLIFSALNLIRRLQNQ
NGDVVEEMHATPKKIFQILNQLIEALSSIPAPELALRLYLECAEAANDCDLEPVAYEFFT
RAFIIYEEDISDSKAQVTAIHLIIGTLQRMNVFGIENRDTLTHKATGYSAKLLKKPDQCR
AVYACSHLFWVDDPEGIKDGERVLLCLKRALRIANAAQQMATVTRGSSGPVTLFVEILNK
YLYYFEKGNQQITTAAIQGLIELITTELQSDPPSASPSLDAFFTSTLRYIQFQKQKGGVM
GERYDSIKV
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgttatcggttgcaattgaagacgaagagaaatggctggcggaaggaatcgctggaatt
caacacaatgccttctacatgcatcaagccgtggacgcgaacaatctcagagaagccctc
aaatactcggctctgatgctttcggagcttcgaacttcgaagctttcaccacatagatat
tacgaactctatatgcgagcctttgacgaattgaggatgttggaaatattttttaaggac
gaaagtaggcatggcgtaacggtcgtcgatctgtatgaactcgtgcaacacgccgggaat
atattgcccagactgtatctcctttgtacggttggctcagtctacatgaaatctaaggag
gtcccagcgaaggagatcctcaaagatctcgtggaaatgtgtcgtggagttcaacatcca
ttacgtggtctctttgttagaaactatctagcacaagtcagtagggacatattgctagat
attaattctgaatgcgaaggcgatgctgacactgtcatggaggccgtagaatttgtgcta
caaaattttactgaaatgaataaactttgggtgcgaattcagcttcagggacctgctcgg
ttgagagagaagcaggaaaaagagagaagcgaacttcgtgatctcgttggaaagaatctc
catgttctcagtcagatagagggtgtggaccttgaaatgtacaagcagactgttcttcct
agagtcttggagcaggtggtcaactgcaaagatgagttatctcagtactatctgatggat
tgtattattcaggtgtttccagatgaataccatttacagacgcttgagacattgttgggt
gtttgcccgcagcttcaggcaactgttgacatcaggatggttctttctcaattaatggat
agactatcaaactatgctgtttccaatgcagatgtaatacctgaatttctgcatgtagaa
gcctttgctaagttgagcaatgctattgggaaggtaatagaagcacaggttgacatgcct
attgttggagctataacattgtatgtctcccttctgtcatttacccttcgtgttcatcca
gatcggcttgattatgtggaccaaatattgggagcatgcgttaaaaaactctccagccaa
ccaaagcttgaagataccagagcaacaaaacaaatagttgtgcttctcagtgctccatta
gagaaatataatgatattgtgacagctcttacactctcaaattatcctcgtgtcatggac
cacctggacaatgccacaaacaaagttatggccatggtcattattcaaagtataatgaaa
aataactcttgcatttctactgctgataaggttgacgtgttgtttgaactaataaaaggg
cttatcaaagacttggaagaagttactgtcgatgagcttgacgaagaggatttcaaggaa
gagcaaaattctgttgcccgcctcctacacatgctacataacgatgacccagtggaaatg
ttagagattatctgtgccgtgaagaagcacatattgtgtggaggaccaaatcgcctgcct
ttcactgttcctcccctgatattttctgccctcaatttaattagacggttacaaaatcaa
aatggggatgtggtagaagaaatgcatgctacaccaaagaaaatatttcagattttaaat
cagcttatcgaggcactttcctctattccagctcctgaattggcactaaggttatacctg
gaatgtgctgaggcagctaatgactgtgaccttgaacctgttgcgtacgagttctttact
cgagcatttataatctatgaggaagatatttcggattctaaggctcaagtgactgcaata
caccttattattgggactctgcagaggatgaatgtgtttggcattgagaacagagatact
ttgacacacaaagctactgggtattctgcgaagcttctaaagaaaccagatcagtgtagg
gctgtttatgcatgctcgcatctcttttgggttgatgatccagaaggcattaaggatgga
gagagagttcttctttgcctaaaacgtgccctacgaattgcaaatgctgctcaacagatg
gctactgttacacggggcagcagtggacccgtcacactttttgttgaaatactgaacaag
tacctctactatttcgagaaaggaaaccagcagattacaaccgctgcaattcaagggttg
attgaattaataacaactgaattgcagagtgaccccccgagcgccagtccttctttagat
gcattctttaccagcacacttcgctacattcagttccagaaacagaaaggtggtgtgatg
ggtgaaagatatgattccatcaaggtttga
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