Cucurbita maxima (winter squash): 111476549
Help
Entry
111476549 CDS
T05246
Name
(RefSeq) transcription initiation factor TFIID subunit 5 isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111476549
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmax03021
]
111476549
03036 Chromosome and associated proteins [BR:
cmax03036
]
111476549
Transcription machinery [BR:
cmax03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
111476549
Coactivators
SAGA/TFTC/STAGA complex
111476549
Chromosome and associated proteins [BR:
cmax03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
111476549
STAGA complex
111476549
TFTC complex
111476549
SAGA complex
111476549
SLIK complex
111476549
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
TFIID_NTD2
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR55
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_IFT122_1st
Beta-prop_EML
ANAPC4_WD40
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_Aladin
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR41
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_VPS8
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Tricorn_2nd
LisH
PALB2_WD40
Dimer_MINDY4_N
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
111476549
NCBI-ProteinID:
XP_022976024
UniProt:
A0A6J1IMC3
LinkDB
All DBs
Position
Unknown
AA seq
674 aa
AA seq
DB search
MDEEQIANFVSAYLKKKGFKETEQAFQDELRHNKTNSSSSASSIDLDFAKRLLSFSEVEN
IPARYLEGYSKLRSWAYNSLDLYKHELLRVLYPVFIHCFMDLVAKGHIQEARTFFNRFRE
DHEMLHLRDLQKLEGVLSPSHLEEMEFAHSLRQSKVNIKICQYSYEMLLQYLHKTQTTVI
LGIINERINFQVFPGQPSSISDDAELVTLSGSTQETANQINKKEVQWGLLEDSLEERLEK
AAGLLSDSEKAEVETKDGDVDENKKRTTEGGKQGASIKKVKKDKTAGAPGKTLRAEANSA
SMAPRVKPELALPIITTEVEQSILEDLRNRVQLSSVALPSVSFYTFINTHNGLNCSSISH
DGALVAGGFSDSSLKVWDMAKLGQQAGNTVLQDENDMSTSDPVTGHTSGKRSYTLFQGHS
GPVHSATFSPIGDFVLSSSADTTIRLWSTKLNASLVCYKGHNYPVWDVQFSPVGHYFASC
SHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHANCNYIATGSSDKTVRLWDVQSGECVR
IFIGHRSMILSLAMSPDGRFMASGDEDGTIMMWDLSTGRCVTPLIGHTSCVWSLAFSCEG
SLLASGSADCTVKLWDVTSSTKPPRTDENKSGTANRLRSLKTLPTKSTPVYSLRFSRRNL
LFAAGALSKSASTA
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagaacagatagcgaattttgtgtcagcgtacttgaagaagaagggtttcaaa
gaaacggaacaagcttttcaggatgagctacgccataacaagaccaattcatcctcttca
gcctcttccattgacctcgacttcgctaagcgcttgctctccttctccgaagtagagaat
attccagccagataccttgaaggatatagcaagcttaggtcctgggcttacaactcgcta
gatttgtacaagcatgaattgcttcgtgtgctatatcctgtgtttatccattgtttcatg
gatctcgtggctaaaggacatattcaagaagctcgaacctttttcaataggttccgtgaa
gaccatgaaatgttgcacctacgagatctacaaaagttggaaggcgtactatctccttct
catttggaggagatggaatttgctcattctctaaggcagagcaaagttaacataaaaata
tgccagtactcctatgagatgctacttcaatatcttcataagacccaaaccacagtgata
cttgggattatcaatgagcgtatcaacttccaagttttccccggtcagcctagctcaata
tctgatgatgctgaactggtgacactctcgggaagcacccaggagactgccaatcagata
aataaaaaagaagtccaatgggggttacttgaagattctttagaagaacgcttggagaaa
gctgctggtttgctttcagattctgagaaggctgaggtagaaaccaaggatggtgatgtg
gatgagaataagaaaagaacaactgagggaggaaagcaaggtgcttcaattaagaaggtc
aagaaggacaagactgccggtgcacctgggaaaactctgagggctgaagctaattctgca
tctatggcgccacgagtgaagccagagcttgctttacctataattacaacagaggtggaa
caatctattcttgaagacttgagaaaccgtgtgcagttgagttctgttgctctgccatca
gtcagcttttataccttcattaatacacacaacggtttaaactgttcatcaatatctcat
gatggagctttagttgctggtggattttcagactcttcattgaaggtttgggacatggca
aagctgggacaacaagctggcaatactgttttgcaggatgaaaacgacatgtctactagt
gatccagtgacagggcatacaagtgggaagaggtcttatacattatttcaaggtcattct
gggcctgttcactctgccactttcagtcccattggggacttcgttctttcatcctctgca
gacacaactattcgattgtggagcacaaaactaaatgccagtcttgtttgctacaaaggt
cacaattacccagtatgggatgttcagtttagtccggttggacattattttgctagttgt
tcacatgatcgaactgcaaggatctggtctatggacagaattcaacctctgaggatcatg
gcaggacatctatccgatgtggattgtgttcaatggcatgccaactgcaactacattgca
actgggtcaagtgacaaaacggttagattgtgggatgtccagagtggggaatgcgttcga
atcttcatcggtcacaggagcatgatcctgtctttggctatgtcacccgatggtcggttc
atggcatccggtgatgaagatggtacgattatgatgtgggacctatcaactggtcgctgt
gttacacctttgattggacacacatcatgcgtttggagccttgctttcagttgtgagggt
tctctccttgcctctggctctgccgattgcacagtgaaattatgggacgtaacttcaagc
acaaagccacctagaacagatgaaaacaaaagtggaactgccaatagacttagatccttg
aagactctaccaaccaaatcaactccagtttacagtttgcggttctctcggaggaatctc
ttatttgcagctggggctctctccaaaagtgcatcaacggcctga
DBGET
integrated database retrieval system
