Cucurbita maxima (winter squash): 111476638
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Entry
111476638 CDS
T05246
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 32
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
cmax
Cucurbita maxima (winter squash)
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cmax03009
]
111476638
Enzymes [BR:
cmax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111476638
Ribosome biogenesis [BR:
cmax03009
]
Eukaryotic type
90S particles
Helicases
111476638
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
111476638
NCBI-ProteinID:
XP_022976175
UniProt:
A0A6J1IIS0
LinkDB
All DBs
Position
Unknown
AA seq
732 aa
AA seq
DB search
MKQKFKSKKSSGKQKRLSEIEEIKLLNSWIQSQKPDSGSNPMSLPPPPAGAPLGRIDADT
YSCYAGATKFDQLPISNKTKDGLRKAEFVDMTDIQRASLPHALCGRDILGAAKTGSGKTL
AFLIPVLEKLYRERWGPEDGVGSIIISPTRELGAQLFDVLKAVGKFHNFSAGLLIGGRKD
VNTEKEHVNELNILVCTPGRLLQHMDETPNFDCSQLQVLVLDEADRILDVGFKKTLNAII
SQLPKHRQTFLFSATQTKSVQDLARLSLKDPEYLSVHEESVTATPSSLQQTALVVPLEQK
LDMLWSFIKAHLNSKILVFLSSCKQVKFVFETFKKLRPGIPLKCLHGRMKQDKRMGIYSE
FCEKRSVLFSTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYHSGGRSVLFLM
PSEMKMLEQLESAKVPIQLIKANTKRLQPVSGLLSALLVKYPNFQQLAQRAFITYLRSIH
IQKDKEIFDVMKLSIDDFSASMGLPMTPRIRFIDQKKRSQKMSANTTTYLALESSDNENA
LNPSGEELEYGDFKESNQGLLPPTDIPTSEVEDAVPRTRILKKKKLKINVHRPLGTRVSF
DDEGNPLAPLARLADIKSSNETFVVDKDLKNEFYKKRREELKQADKEDKLLNHNRLKEKR
KEKMNKMKKRAAKEIEDDDDVSASEEDRPQKRSKKFVDCDSDIDNKADLNTESITVAEQE
ELALKLLSTLRP
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagaaattcaaatccaagaagtcgtctggcaagcagaagcgtctatccgaaatt
gaagaaattaagctcttgaattcatggattcaatcccagaaacccgactcaggctctaac
ccgatgtcgcttcctccacctcctgcgggtgctccccttggccgcatcgacgccgatact
tactcttgttacgccggagctactaagtttgatcagttgccgatttcgaacaagaccaag
gatgggttgcggaaagctgaattcgttgatatgacggacatacagagggcttcactgcct
cacgccctttgtggtcgagatattcttggtgcagccaaaactggttcaggaaagacgcta
gcttttctcatacctgttcttgagaagttgtatagagagagatggggtcctgaggatgga
gttgggagtataataatatctcccacaagagaattaggagctcagctttttgatgttcta
aaagctgttgggaaatttcataatttcagtgctggccttttaattggtggtcgtaaagat
gttaacactgagaaggagcatgtgaatgagttgaacattcttgtttgcactcccggtcga
ctccttcagcacatggacgagactccaaattttgattgttcacagttgcaggttttagtc
cttgatgaagctgatcgtattcttgatgtcggatttaagaagactttaaatgcaattatt
tcacagctacctaagcacagacaaacctttctgttctcagcaactcaaacaaagtctgtt
caggatcttgccagactcagtttgaaagatcctgagtaccttagtgttcatgaagaatct
gtgacagctacccccagtagtttacaacaaactgctttggttgttcctctcgagcaaaag
ctagacatgctatggagctttataaaggcacatcttaattctaagattcttgtgtttctc
tcaagctgcaagcaggtgaaatttgtttttgaaactttcaaaaagctgcgtcctggaatc
ccattgaagtgcctccatggaaggatgaagcaggacaaaaggatggggatatattctgag
ttctgtgagaagcggtcagtcctcttctcaacagatgtagcctctagaggtcttgatttt
aataaggctgttgactgggttgtacaggttgattgcccagaagatgtggcttcttacata
catagagttggccgcactgctcggtaccattcaggtgggagatcagttttatttcttatg
ccctcggagatgaaaatgcttgaacaattagaatctgctaaagtacctattcagcttatc
aaggcaaatacaaaaagacttcaaccagtttctggtttgctgtcagctttgttagtcaag
tatcccaattttcagcaactcgctcaaagggcctttatcacatatcttcgatcaattcat
atccagaaggataaggaaatctttgatgttatgaaactatcaattgacgatttttcagct
tcaatggggctgccaatgaccccaagaatccgtttcattgatcagaaaaagaggtcacag
aagatgtcggctaacactaccacttatcttgcgttggaatcgtctgataatgagaatgct
ttaaatccatccggtgaagaattggagtatggcgactttaaagaaagcaaccaaggactt
cttcctcctactgatatccctactagtgaagttgaagatgctgtgccacgtactcggatt
ttgaagaaaaagaagttgaagatcaatgtccatagaccattagggacgagagtcagtttt
gatgacgagggcaacccacttgcccctcttgctaggctagctgacatcaaaagtagcaat
gagacatttgtagtcgacaaagatctaaaaaatgagttttacaaaaagaggagggaagag
ttgaaacaagctgacaaggaagacaaacttctcaatcataatcgccttaaggagaagcgg
aaagagaagatgaataagatgaagaagagggctgccaaagaaattgaggatgacgatgac
gtatctgcgtctgaagaagacagacctcagaaaaggtccaagaaatttgtcgactgtgat
agcgacattgacaataaagcggacttaaatacagagtcgattacagtggcagaacaagag
gagttggctctcaaattactaagtactctgcgcccatga
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