Cucurbita maxima (winter squash): 111477004
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Entry
111477004 CDS
T05246
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog A-like isoform X1
KO
K11267
sister chromatid cohesion protein PDS5
Organism
cmax
Cucurbita maxima (winter squash)
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmax03036
]
111477004
03400 DNA repair and recombination proteins [BR:
cmax03400
]
111477004
Chromosome and associated proteins [BR:
cmax03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
111477004
DNA repair and recombination proteins [BR:
cmax03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
111477004
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
HEAT_GCN1_C
Cnd1
TPR_DNAAF5
Motif
Other DBs
NCBI-GeneID:
111477004
NCBI-ProteinID:
XP_022976673
UniProt:
A0A6J1IMW1
LinkDB
All DBs
Position
Unknown
AA seq
1278 aa
AA seq
DB search
MDQSSLQLIHDVGTKLSKQSRPTKDFIVKSLRQVVDAFACLEQSYVPDASGKSEAPKKME
SSINPLMKSIINGLLRNRDKDVRLLLAICVSEIFRVLAPEPPFEDKYLRDVFILLLSSFS
ELADTTSPLFSWRVKILETVARCKCCVIMLDIGCNDLVLEMFNTFFSVLRDYHEPSLVNN
ILSIMTHILSEDASLPLVDVVLHNLVKEEKGEPTAASRLAVSIIETCAETLEPFICGFLT
SCISERDVVGSELKEFYHEIVFRIFQCVPQMLLPVIPNLALELVTDQVDVRIKAVKIIGR
LLALPGHCVAQKYRGLFMEFLKRFCDKSAEVRIHAIQCAKDCYTANPASSESLEVLAAVE
ERLLDLDDRVRTQAIIVVCDIARSTSKFVPVTLISQVAERLRDKRISVRKKALQKLLEVY
RDYCDKCSKDQLTMKNDFEQIPCKVLMLCYDKDCKEFRSQCMELVLVEDLFPADLSVEER
TRHWIHLFSLFNIHHEKALGYILLQKQRLQNELRTYLGLRKKDKENRSEETEKQIETAFV
KMAACFPDATKAKESFHKLNQIKDNNIFNYLELLLDQSTIVEAEATREKLLRMIGSKQPH
FEFLKSLSLKCSYNLFSTEHVHFALGCILSNRVGNKHLESPTGKLLLAIISIFPSLLRGL
EGQLLRLLEESNPIDCKLIEILSKAGPHLSIELRDVYPFLERLCLEGTCAESKRAVSAIA
ALASTSGHFWFSKLCKELVDSLHRGLNLPTVLQSLGCIAKYSVSTFDDQDVGIIPYIYEN
IFHVDLSDNLNKLHDDAAGSNSSDLKIYGLKTLVKSFLPHQGTPKRNLGEFLNILSRMLN
KCEASVEIIPIEDNQARIRLAAAKSVLRLAKRWDSQITPEIFHLTILMAKDPSSFVRRLF
IDKAHKLLKEQAIPTRYACAFAFCISDSMKDLQDDSLKYMAEFIEQYNKIARMHQTSVVQ
EESMTFVPAYIVVFLIYILAHDSDFPHVDCQDENVYAQFCSPLLFVLQMLVNADVNGSKE
TVLYLHSIFRAIKRVEDAVDMDSSHKLHILADIGLSFVTALNSSGVSLSCAPKQILLPLS
LYRVNSRKLSRHAYDECFVGRVIKAFQSQIILPVNTSIRGDQKFLEEDIMQTNINPCSSM
SMRACKQVETISSRATKINKTVNQEIIVGRRRKRAASPTMSAPIELRECSQAQQNFPANR
EKGKFSSQCGTTEASLVEGDASIQNVDVNVTSQDDVLAKRSLDDASPMYVNDQLTDPYSM
KVADISGNVELLSSETES
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
atggatcagtcttcgctgcaactcatccacgacgttggaactaaattgagcaaacagtct
cgcccaactaaggatttcatcgtcaaatccctccggcaagttgtcgatgcttttgcatgt
ttggaacagtcttacgttccagatgccagcgggaagtcagaagcacccaagaaaatggag
agttctataaaccctctaatgaaatctataattaatggtcttctacggaatagagataaa
gatgtgagacttctattagccatatgtgttagtgagattttccgggttttggcaccagaa
ccacctttcgaagataaatatctaagggatgtttttatacttcttttgagttctttttcg
gagctagcggatacaacaagcccacttttctcttggagggttaaaatactagagacagtg
gcacgatgcaaatgttgtgtgataatgcttgacattggatgcaatgacctggtattggag
atgttcaatacatttttctctgttttgagagactatcacgaacctagtttggttaacaac
attctgtcaataatgacccatattctaagcgaggatgcctctctaccgctagtagatgtg
gttttgcataatcttgtaaaggaggaaaagggtgaacctacagctgcttctcgccttgcg
gtttccatcattgaaacttgtgctgagacgctggaaccatttatttgtggattcttaacg
tcttgtatttcagagagagatgttgtggggagtgaactcaaagaattttaccatgaaata
gtttttagaattttccaatgtgtccctcaaatgcttcttcctgtgattccaaacttggct
ctagagcttgtgacagatcaggttgatgtaagaataaaagcagttaaaatcatcggtaga
cttttagctctacctggacactgtgtagcacagaagtaccgaggactttttatggagttc
ttgaaaagattttgtgacaagtctgcagaagttagaattcatgccatccaatgtgctaaa
gattgttatacggccaatcctgctagttcagaatctctcgaagttcttgctgcagttgaa
gaacgattactagacttggatgatagagtgagaacacaagcaataattgttgtttgtgat
attgcccgatcaactagcaaatttgttccagtgacactaatatctcaagttgctgaaaga
ctacgagataagaggatatcagttaggaaaaaagcccttcagaaattgttggaagtatat
cgagattactgtgataaatgttccaaagaccaattgactatgaagaatgactttgaacag
atcccatgtaaagtcttgatgctttgctatgataaagattgtaaggagttcagatcccag
tgcatggaacttgttcttgtggaagatttgttcccagctgatctctctgttgaggaaaga
actaggcactggatccatttattctctcttttcaatatccatcatgaaaaggctcttgga
tacattttgctgcaaaaacagaggttacaaaatgagttgcgaacatatttgggtctacgt
aaaaaagacaaggagaaccgatcagaagaaacagaaaagcaaattgaaactgcatttgtc
aaaatggcagcctgctttcccgatgctacaaaagcaaaggagtcctttcataaattaaat
caaattaaagataataatatttttaattatttggaacttctacttgatcaatcgacaatt
gttgaagctgaggctaccagagaaaaattgttgaggatgataggaagtaaacagccccat
ttcgagtttttgaaatcactctccttaaagtgctcatataatttattcagcaccgaacat
gtacactttgcattaggctgcattctgagcaacagagtcggaaacaaacatttggagagt
ccgactggcaagcttctactggctatcatcagcattttcccctcactcctcagaggcttg
gaaggccaactgctgaggttgttggaagaaagcaatccaattgattgtaagctgatcgaa
atattgtctaaagctggccctcacttatcaattgaactcagagatgtatacccgtttctg
gagaggttatgcttggagggtacttgtgctgaatcaaaaagagctgtttctgccattgca
gctttagctagtacttctgggcatttttggttctctaaattatgtaaggaactggttgat
tctctacacaggggattgaatctcccaacagtactgcagtctttaggttgtattgcaaaa
tattctgtttcaacatttgatgatcaggatgtagggatcataccttatatatatgagaac
atcttccacgtggacttatcagataatttaaataaattgcacgatgatgctgcaggcagc
aattcttccgatttgaagatttatgggctgaaaacactcgttaagagtttcttgccacat
caaggaactcctaaaagaaatcttggcgagtttctgaatattctatcacggatgctgaac
aagtgtgaagcttctgttgaaatcattcctattgaggacaatcaggctcggatcagacta
gctgctgcaaaatcagttcttcgtcttgccaaaagatgggattcacaaattacaccagag
attttccatttgacaatcttgatggcaaaggacccctcttcttttgttagaaggctattc
attgacaaagcgcacaagttactaaaggagcaggctatacctacccgatatgcttgtgct
tttgcattttgcatttcggatagcatgaaagatcttcaggatgattcacttaaatatatg
gcagaatttattgagcaatacaataagatagcacggatgcatcaaacatctgtggttcaa
gaagaatcaatgacttttgtccctgcgtatatagtagtattcttgatatatattctagct
catgattcagacttcccacatgtagactgtcaagatgaaaatgtatatgctcaattttgt
agcccactcctatttgtgttgcagatgttggtcaatgcagatgtaaatggttccaaggag
actgttttgtatctgcacagtatttttcgtgccattaagagggttgaggatgctgtggat
atggattcatcacataaattgcacatcttggcggacattggactctcttttgtaacagct
ctaaattcttctggagtttccctgtcatgtgccccaaagcagattttgttgccgttatct
ctatatagagtaaattccaggaagctttctcgacatgcttatgatgaatgttttgttgga
agagttattaaagcatttcaatctcaaatcattttgcccgttaatacttctataagaggt
gatcaaaagttcttggaggaggatatcatgcaaaccaatatcaacccgtgttcctcaatg
agcatgagagcttgtaagcaagttgaaaccatttcctccagagcaacgaagatcaataaa
actgtgaatcaggagattattgttggacgtagacgaaaacgggcagcctctccaacaatg
tctgcaccaattgaattgcgtgaatgttctcaagctcaacaaaatttcccagcaaatagg
gaaaaaggtaaattttcttctcaatgtggaactacagaagcttctctggttgaaggcgac
gcatcaatccagaatgtagatgtaaatgtaacttctcaagacgatgtgttggcaaagaga
agtttggatgatgcatccccaatgtacgtcaacgaccagcttactgatccttacagtatg
aaggtcgcagatatcagtgggaatgttgaacttctaagctcggaaactgagagttag
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