Cucurbita maxima (winter squash): 111477015 Help Entry 111477015         CDS       T05246                                  Name (RefSeq) protein PAT1 homolog 1-like   KO K12617   DNA topoisomerase 2-associated protein PAT1 Organism cmax  Cucurbita maxima (winter squash) Pathway cmax03018   RNA degradation Brite KEGG Orthology (KO) [BR:cmax00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     111477015  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cmax03019]     111477015 Messenger RNA biogenesis [BR:cmax03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      111477015   mRNA degradation factors    5'-3' decay     Decapping complex      111477015 SSDB OrthologParalogGFIT Motif Pfam:  PAT1 Motif Other DBs NCBI-GeneID:  111477015 NCBI-ProteinID:  XP_022976705 UniProt:  A0A6J1IK80 LinkDB All DBs Position Unknown AA seq 813 aa AA seqDB search MDVFGNGARVQVASTSGDLKRFGANSTEDALFDASQYAFFGKDVMEEVELGGLEDEEDDT LAAGIEEEEEFLFDKESEDFRPPSDIDDLVSSFERLSEVGSGPTGVIGGRALRESSSVNE WPHEEGFSDWLAQQGYNVESAQEGKRWSSHPHFSSLAESTSLYRTSSYPDQQPQLQQYHQ QISSEPISVPKSSHPPIGISPHASPNQHSSHLNMPFVPSGRHVVSLSPSNLTPPNSQIAG FISGSRFGNMPQFNSGLSANGGPQSQCVNQVGMFRGEHSSHLNNLLPQQLPNQNGFPQLP PQPPQQQQHRLQHPVQPPFGGSLSGFQSHLFNSHVSSGPPHLMNKLEAMLGIPDMRDQRP RSQKGRQNPRFIHQGNETSSFRNNFGWPFCRSKYMGADELENIVRMQLAATHSNDPYVDD YYHQACLSRKSAGAKLRHHFCPNQLRDLPPHARANNEPHAFLQVEALGRVPFSSIRRPRP LLEVDPPSSSVGGSSDQKVSEKPLEQEPMLAARVTIEDGHCLLLDVDDIDRFLQCNQFQD GGAQLRRRRQVLLEGLAASLHIVDPCSKDGHTVGLAPKDDFVFLRLVSLPKGRKLLGKYL QLLIPGGELKQIVCMAIFRHLRFLFGSVPSDPGAADSVSELARIVSLQTRSMDLGALSAC LAAVVCSSEQPPLRPLGSPAGDGASLILKSVLERATELLTDPHAASNYNITHRSLWQASF DEFFGLLTKYCVNKYDSIMQSLLRQSPQNAAVAVLDQATAISQEMPVEVLRASLPHTEEY QKRVLIDFAQRSMSVGGSNNGAEHCGRNNFDSL NT seq 2442 nt NT seq  +upstreamnt  +downstreamnt atggatgttttcggtaacggagctagagttcaagtggcatctacgtccggggatctcaag cgttttggagccaattcaacagaagatgctctgtttgatgcatcgcagtatgcatttttt gggaaggatgtcatggaggaggttgaattggggggattagaagatgaagaggatgataca cttgctgctgggattgaggaggaggaggagtttttgtttgataaggagagtgaggacttt agacctccatctgatattgacgatcttgtttcttcttttgaaaggttgagcgaggttggt agcgggcctacgggagttattggaggtagagcattgagagaaagttcgtcagttaatgaa tggccacatgaggagggcttctccgattggcttgcccagcaaggctataatgtggaaagt gctcaggaaggaaaaagatggtcatcacatccacatttttcctctcttgctgaatctacg tctttatataggacatcttcttaccctgatcagcagccgcagctgcagcaataccaccaa cagatctctagtgagccaatttctgtcccgaagtcttcacatcctcctatcggaatatct cctcatgcttcgccaaaccagcattcaagccatctaaacatgccttttgttccttctgga cgccatgtagtatcattatctccatcaaatctcacaccaccaaactctcagattgctggt ttcatttctggatcacgatttggaaatatgccgcaatttaactctggtctctctgctaac ggtggaccgcagagccaatgcgtcaaccaagttggcatgtttcgtggagaacattccagt cacctaaacaatttattgcctcaacagttaccgaatcagaatggatttccacagttacca ccacagccgccgcagcagcagcagcataggttgcaacatcctgttcagcctccatttggc ggttctctatcaggttttcagtcccatctttttaattcccatgtatcttcaggcccacct cacttaatgaacaagttggaagccatgctcggcataccagatatgagggatcaaaggcct aggtctcagaaaggtagacagaaccctcgttttatccatcagggtaatgagaccagtagt tttaggaataacttcgggtggcctttctgtagatccaagtatatgggagcggatgaatta gagaatattgttagaatgcagcttgcagcaacacacagtaatgatccatatgtagatgac tactatcatcaggcttgtctttcaagaaaatctgcaggagcaaagttgaggcatcatttt tgtcctaatcaactaagggatcttccaccacatgcccgtgccaataatgagccgcatgct tttcttcaggttgaagcacttggtagggttccattctcatcaattcgtagacctcgccct cttcttgaagtggatcctccaagttcgtctgttggtggaagctctgatcaaaaggtttct gagaagccccttgaacaggagcctatgctagcagctagagttacaatcgaggatggtcat tgtctgcttcttgacgtggatgatattgatcgtttcctgcaatgcaatcagttccaagac ggtggtgctcagttacgaagacgtcgccaggtcctgttggaaggactggctgcatcactt cacatagttgatccatgcagtaaagatggtcacacagttgggctggctcctaaagatgat tttgttttcttgaggttggtttctcttcccaagggtcgaaagcttctcggaaagtacctt cagctgctcataccaggtggtgagctcaaacaaatagtttgtatggctattttccgtcac ttaagattcttgtttggtagtgttccttctgatcctggggcagcagattctgttagtgaa cttgcaagaattgtctcattgcaaacccgtagtatggatcttggagccctaagtgcatgt cttgcggctgtagtttgctcctcagagcaacctccacttcgccctctagggtcccctgct ggagatggggcgtccttgattttgaaatctgttctcgagagggccacggaactcctaacc gaccctcatgctgcgagtaactataacattactcaccgctctctttggcaggcttcgttc gatgaatttttcggccttcttacaaagtattgtgtaaacaagtacgatagtatcatgcaa tcactactaagacaatctccacagaatgcagcagtagctgtcttggatcaagccactgcc atcagtcaagaaatgccagtcgaagtattacgggcaagccttccccataccgaagagtac caaaaaagagtattaatagattttgctcaacgctcgatgtctgttggtggatctaacaat ggggccgagcactgtggtcgcaacaacttcgattccttatga

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