Cucurbita maxima (winter squash): 111477027
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Entry
111477027 CDS
T05246
Name
(RefSeq) ABC transporter E family member 2
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
cmax
Cucurbita maxima (winter squash)
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cmax03009
]
111477027
Ribosome biogenesis [BR:
cmax03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
111477027
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
Fer4_RLI
SMC_N
AAA_21
Fer4
AAA_15
AAA_22
AAA
Fer4_6
AAA_23
AAA_29
RsgA_GTPase
Rad17
NACHT
NPHP3_N
Fer4_2
Fer4_9
AAA_16
nSTAND3
TsaE
VapE-like_dom
SRP54
Fer4_21
Fer4_10
AAA_33
AAA_5
ORC-CDC6-like
Fer4_4
AAA_24
Fer4_16
Fer4_7
AAA_7
AAA_19
Pox_J1
Fer4_17
Mg_chelatase
AAA_13
Fer4_8
Motif
Other DBs
NCBI-GeneID:
111477027
NCBI-ProteinID:
XP_022976728
UniProt:
A0A6J1IPH6
LinkDB
All DBs
Position
Unknown
AA seq
605 aa
AA seq
DB search
MADRLTRIAIVSSDRCKPKKCRQECKKSCPVVKTGKLCIEVTPAAKIAFISEELCIGCGI
CVKKCPFEAIQIINLPKDLDKDTTHRYGPNTFKLHRLPVPRPGQVLGLVGTNGIGKSTAL
KVLAGKLKPNLGRFNNPPDWQEILTYFRGSELQNYFTRILEDNLKAIIKPQYVDHIPKAV
QGNVGQVLEQKDERDMKQELCRDLELNQVIDRNVGDLSGGELQRFAIAVVAIQNAEIYMF
DEPSSYLDVKQRLKAAQVVRSLLRPNSYVIVVEHDLSVLDYLSDFICCLYGKPGAYGVVT
LPFSVREGINIFLAGFVPTENLRFRDESLTFKVAETPQESAEEIETYARYKYPTMSKTQG
NFKLRVVEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPDSVENSDVEIPEFNVSYKPQ
KISPKFQSTVRHLLHQKIRESYMHPQFVSDVMKPLLIEQLMDQEVVNLSGGELQRVALCL
CLGKPADIYLIDEPSAYLDSEQRIVASKVIKRFILHAKKTAFVVEHDFIMATYLADRVIV
YEGQPSVDCTANCPQSLLTGMNLFLSHLDITFRRDPTNFRPRINKVDSAKDREQKSAGSY
YYLDD
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcgattgacgcgtatagctatagtgagttcggataggtgtaaacctaaaaag
tgccgtcaagaatgcaagaagagctgtcccgttgttaagactggtaaactatgtattgag
gttaccccagccgctaagattgcttttatctcagaagaactatgtattggatgtggtata
tgtgtcaagaaatgcccatttgaagcaattcaaatcatcaatctgccaaaggatttggat
aaagatacaacacatcgatatggccccaacaccttcaaattgcacaggttgccagttcct
cggcctgggcaagttcttggtttggttggaaccaatggtattgggaagtccactgcactg
aaagtcttggctggaaagctgaaaccaaatcttggccgtttcaataacccaccagattgg
caggagatattgacttactttcgaggatctgagttgcagaattattttacacgtatcctt
gaagataatctaaaggcgatcataaagccccagtatgttgatcacattccgaaagcagtt
caagggaatgttggtcaggtgctagagcaaaaagatgagagggatatgaagcaagaatta
tgtcgtgatcttgaacttaatcaggttatagataggaatgttggtgacctgtctggtgga
gaacttcaaagatttgccattgctgttgttgccatacagaatgcagagatttatatgttt
gatgaaccctcaagttaccttgatgtgaaacagagacttaaagctgctcaagtggttcga
tctttgctcaggcccaatagctatgtaattgttgtggagcatgatcttagtgtcttggat
tatttgtctgatttcatttgttgtctttatgggaaaccgggtgcatatggagtcgttacc
cttcctttttcggttagagaaggaatcaacatcttcttggctgggtttgttcccacagaa
aatctacgatttagagatgaatctcttacattcaaggttgctgagactcctcaagaaagt
gcggaggaaatagaaacatatgcacggtataaatacccaaccatgagtaaaactcaggga
aatttcaagcttcgtgtggtagagggtgaatttactgattcacagattattgtgatgctc
ggtgaaaatggtacagggaagacaacatttattcgtatgctggcgggtttgttgaaacct
gattctgtcgaaaactctgatgttgagattcctgagtttaacgtttcctacaagccccag
aagattagtcctaagtttcaatccactgtcaggcatttgttacatcagaaaataagggag
tcctacatgcatccgcaatttgtttcagatgtaatgaaacccttgcttatcgaacaatta
atggaccaagaagttgtgaatctttctggaggagagttgcaaagggttgcgttgtgcctc
tgccttggaaagcctgcggatatctatctgatagatgaaccgagtgcttaccttgactct
gagcagcgtattgttgcatccaaagtcatcaagagatttattcttcatgcaaaaaagacg
gcttttgtggttgaacacgattttattatggcaacttatctagcagatcgagttattgtt
tacgagggtcagccatcagttgattgtactgctaattgtcctcagtcattgttgactgga
atgaatctcttcttatctcatctcgatattacatttagaagagatccaacaaatttcagg
ccaagaattaacaaggtcgactccgcaaaggatcgggagcaaaagtcagcaggctcatat
tattatttggatgattaa
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