Cucurbita maxima (winter squash): 111477064
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Entry
111477064 CDS
T05246
Name
(RefSeq) serine/arginine-rich splicing factor SR45-like
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03013
Nucleocytoplasmic transport
cmax03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111477064
03015 mRNA surveillance pathway
111477064
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmax03019
]
111477064
Messenger RNA biogenesis [BR:
cmax03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
111477064
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_ACIN1
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
111477064
NCBI-ProteinID:
XP_022976788
UniProt:
A0A6J1IN70
LinkDB
All DBs
Position
Unknown
AA seq
412 aa
AA seq
DB search
MAKPSRGRRSPPSGSGSSSRSRSYSGSGSRSSSRSRSRSASVSRSRSRSRSISSSSSLSR
SGTSRSRSPAPQRKSPNETARRTRASSPLAKRISPPPRKPSPVRESLVLHIDPLSRNVHE
GHLKEIFSNFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRT
RFTLPQRQKIPTPPRTVATASKRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSP
IARRGGSPRRQPDSPRRRPESPPRRRLESPPRRRPASPMRGGRSPSPLARRHRSPPRPSP
RRIRDSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRKSRSPIRRPARSRSRSSSPRRGQ
PAAAGRRGRSSSYSASPSPRKVPRRVYRSPRRPLRGRSSSRSSSSSSPPRKP
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaccaagcagaggccgtcgttcgccgccgtcgggttcgggatcctcctcacgt
tcccgctcatactccggctctggttcccgctccagttcccgctcgcgctccaggtctgca
tctgtgtcccgctcccgctctcgttccaggtccatttcctcgtcttcgtctctatcacga
agcggtacttctcgaagccgaagccccgctcctcaaagaaagagtccgaatgaaacagct
cggcggactcgcgcttcatctccactagctaaacgaatttctccgccacccaggaaacca
tctcctgtacgcgagtcacttgttcttcacattgatccactgagtaggaatgtccatgag
ggtcatttaaaagaaatcttcagtaattttggtgaagtagtccatgttgagctggcaatg
gatcgcacagtcaaccttcctaaaggatatggatatgttgaattcaaaacaagacctgat
gctgaaaaagcccaattgcatatggatggtgcccaaattgatgggaatgttattcgaaca
agatttacattgcctcaaagacagaagatcccaacacctccaaggactgtagcaaccgct
tcaaagagagatggtcctaagcctgaaaatgttggtgctgatgctgagaagaatgacatg
aaaagacagagagaaccttcacctcgtcgaaagcctccttctcctagaagacgctcgcct
attgctcgacgaggtgggtctcctagaagacaacccgattctcctcgccgccgtccagag
tctcctccgcgtcgccgcttagaatctccccctagaaggaggcctgcatcacccatgaga
ggtggccgttctccatcgcctttggcaaggcgacatagatctcctccaaggccctctcca
agaagaattcgtgacagtcctgttcgaagacgttcaccaccccctcctaggcgccgtaca
ccgcctcgacgtgctcgtagtcctccaagaaggtctccagtagttcgcagaaagagccgt
tcacctattagaagaccagctcgatcacgttcccgatcatcttcaccacggagaggtcag
cctgcagccgctggtagacgtgggagatcatcgtcctactctgcatcacctagtccacgc
aaggtgcccaggagagtatatcgcagtccaagaaggcctttaagagggagaagcagcagc
aggagcagtagcagtagttctccaccccgcaagccataa
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