Cucurbita maxima (winter squash): 111477178
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Entry
111477178 CDS
T05246
Name
(RefSeq) pre-mRNA-processing protein 40A-like isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111477178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmax03041
]
111477178
Spliceosome [BR:
cmax03041
]
Complex A
U1 snRNP components
U1 related factors
111477178
Complex B
111477178
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
FF_PRPF40A
WW
WW_TCERG1
Motif
Other DBs
NCBI-GeneID:
111477178
NCBI-ProteinID:
XP_022976964
UniProt:
A0A6J1IQ49
LinkDB
All DBs
Position
Unknown
AA seq
976 aa
AA seq
DB search
MENLSQSSGGQFRPVIPAQPGQTFISSSTQQFQLAGQNISSSNVGGPAGQVQPHQYPQSI
PQLVPRPGHPTYITSSSQPIQMPYVQTRPLTSVPPQSQQNVPAPNNHMHGLGAHGLPLSS
PYTFQSMSQMHAPVGVGNSQPWLSSVSQTTNTVSPIEQANQNSSVSAVNPQSSSDWQEHS
SADGRRYYYNKKTKQSSWEKPLELMTPLERADASTVWKEFTAPDGRKYYYNKVTKESKWT
IPEELKLAREQAQKEAAQGTQTDIAATTPQPTPAVGLSHTETPAISSVNSSISPTVSGVA
SSPVPVTPFVSVSNSPSVVASGSLTNTGTPIALTTSVPGTVSSQSVAASGGTGPPAVLHA
NASSVTPFESLASHDVKNSVDGTSTEDIEEARKGMAVAGKVNETVLEEKSADDEPLVFAN
KLEAKNAFKALLESVNVKSDWTWEQAMREIINDKRYGALKTLGERKQAFHEYLGHRKKLD
AEERRIKQKKAREEFTKMLEESKELASSTRWSKAVSMFENDERFKAVERSRDREDLFESY
IVELERKEKERAAEEHKKNIAEYRNFLESCDYIKVNSQWRKVQDRLEDDERCSRLEKLDR
LLIFQDYIRDLEKEEEEQKKIQKERVRRIERKNRDEFRKLLDEQITAGILTAKTFWRDYC
LKVKELPQYQAVASNISGSTPKDLFEDVLEELENKYHEEKAQIKDVMKAEKITITSSWTF
DDFKAAIEEGGSLAVSDINFKLVYEDLLERTKEKEEKEAKRRQRLADDFSGLLHTFKEIT
NSSNWEDSKHLFEESEEYRSIGEESFAKEVFEEYIIHLQEKAKEKERKREEEKAKKEKER
EEKEKRKEKERKEKEREREKDKGRVKKDETDSENVDASETHVYREDKKREKDKDRKHRKR
HHSATDDGGSDKDEREESKKSRKHGSDRKKSRKHAYSPESDSESRHRRHKRDHRDGSRRN
HDELEDGELGEDGEIQ
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatctgtctcagtcctcaggtggacagtttcggccagttatcccagcacaacca
ggccagacgttcatttcatcatctacccaacagttccagttagcagggcagaatatatct
tcttcaaatgttggagggccagctggtcaagtccagccacatcaatatcctcaatcaata
ccgcagttagttccaaggcctggccatcctacctacatcacttcttcatcccagcctata
caaatgccttatgttcagacaaggcctcttacttctgtcccacctcagtcccagcaaaat
gtgcctgcaccaaataatcatatgcatggcttgggtgctcatggactacctctttcttca
ccatataccttccagtcaatgtcacaaatgcatgcacccgttggagttggtaatagccaa
ccttggctgtcttctgtaagccaaactacaaacactgtctcaccgatcgagcaagctaat
cagaactcttcagtttctgccgtaaaccctcagtcttcatctgattggcaagagcattca
tcagctgatggaagaaggtattattacaacaaaaaaaccaaacagtccagttgggagaag
ccattggaacttatgacaccacttgagagggctgatgcatcaactgtgtggaaggaattt
actgctccagatggaagaaagtactattacaataaggtgacgaaagaatcaaagtggacc
attccagaagaactgaagttggctcgtgagcaggctcagaaagaagctgcccaaggaaca
caaacagatatagctgctacaacacctcaacctacacctgctgttggtctctcccatact
gaaacaccagcaatttcatctgttaactccagcatttctccaacggtctctggggttgca
tcgagtcctgttccagtcactccttttgtttccgtatccaattctccttcagtggtggct
tctgggtcattgaccaatactggcactcccattgctttaacaactagtgtgccaggaaca
gtttcttctcaatctgtcgctgcttctggaggtaccggtcctcctgctgtgctccatgcc
aatgcttcgtcagtgactccttttgaaagtcttgcatctcatgatgtcaaaaattctgtt
gacggaacttctacagaagacatcgaggaagcaaggaagggaatggcagttgcaggaaaa
gttaacgagaccgttttagaggaaaaatctgctgatgatgaacctttagtatttgccaac
aaactggaggcgaagaacgcattcaaagcgcttctggaatctgtcaacgtaaaatctgat
tggacgtgggagcaggctatgcgagaaataattaatgacaaaagatatggtgccttgaaa
actcttggtgaacggaagcaagcattccatgagtatttaggacacaggaaaaaattggat
gcggaggaaagacgcataaaacagaaaaaagctcgtgaggagttcaccaagatgttggaa
gagtccaaggaactcgcatcatctaccagatggagcaaagctgttagtatgtttgagaat
gatgaacggttcaaagctgttgaacgttctagagaccgggaggatctttttgaaagctac
atagtggaacttgagaggaaggaaaaagaaagggctgcagaggagcacaagaaaaatatt
gctgaatataggaacttccttgagtcatgtgattatataaaggtgaacagccagtggcgg
aaagtacaagatcgattggaagacgatgaaagatgctcacgtcttgagaaacttgatcgc
ttgcttattttccaggactatatacgtgacttggaaaaggaggaagaggagcagaaaaag
atacaaaaggaacgtgtgagacgaattgaaagaaaaaaccgtgacgaatttcgcaaactc
ttggatgaacaaattactgctggtattcttacagctaagactttctggcgtgattactgt
ttgaaggtcaaggagttgcctcagtatcaagccgttgcttctaatatatctggctcaaca
ccaaaggacttgtttgaggatgttctggaggaattagagaataagtatcatgaagaaaaa
gctcagataaaagatgtgatgaaggcagagaagattaccatcacttcatcgtggacgttt
gatgactttaaggctgccattgaagagggtggttctcttgcagtttcagatataaatttt
aagcttgtatatgaggacttactagaaagaaccaaagaaaaggaggagaaagaagccaaa
aggcgtcaacgtctggctgatgacttctcaggacttctccatacattcaaggagattacg
aattcttccaactgggaggatagcaaacatctttttgaagagagtgaagaatatagatca
attggggaagagagctttgcgaaggaagtttttgaggaatacatcattcatttacaagaa
aaggcaaaagaaaaggaacgcaagcgtgaggaggagaaggctaagaaggaaaaagaacgt
gaggaaaaagagaagcggaaggagaaagagcgaaaggagaaggaaagagaacgtgaaaag
gataagggccgggttaagaaggatgaaacagatagtgaaaatgtggatgcaagcgaaact
catgtctacagagaagacaagaaaagggagaaggacaaagataggaagcatcgtaagcga
catcatagtgccactgatgatggtggttctgataaagatgagagagaggagtctaagaag
tcccgcaaacacggtagtgaccgaaagaaatcaaggaagcacgcatattcacctgaatca
gacagtgagagtaggcacagaaggcacaagagagatcatcgagatggttcccgtagaaac
cacgacgaactagaagatggggagcttggcgaggatggggaaattcaatag
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