Cucurbita maxima (winter squash): 111477318
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Entry
111477318 CDS
T05246
Name
(RefSeq) protein RDM16-like isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111477318
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmax03041
]
111477318
Spliceosome [BR:
cmax03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
111477318
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Paralog
GFIT
Motif
Pfam:
PRP3
Prp3_C
Motif
Other DBs
NCBI-GeneID:
111477318
NCBI-ProteinID:
XP_022977165
UniProt:
A0A6J1ILJ1
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Position
Unknown
AA seq
915 aa
AA seq
DB search
MDRVTEKERSSKRSREERNGDHKHRSRDAEEKHFSKDEKHRESDHSHRRRHHRSDRDSKL
ERSHESRDLKHRRDRSPDDCESSQDRDFKRERSYDVRDERERSRDRVSSKRERSSEPRGE
REGSKERGKLREVRREQSDDEYEREDSLGPIQNFVRSSNKRKERGGSEDRFDGGEKRARA
SEDGKDLRRNEDGKEVNGAEMDDRKERRRFADGEKDDEANMSGRGKRERKRFGDRAKEED
NGGNVDGKVQVGGTSDERRSTGNGSTVEHIDMSSSVPQNLLHPGYSHPIKVSSISTTNEN
KGVSIARSHEVHGKSSTDGTSSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK
DGWSSSASSSAVKSEEKAKLAGGLLGLTATTNVTTTLSAGVASSLSTLPAANALGGGINV
PASLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNVATDVAVSQKPSKAPVLRL
DALGREIDEQGNVVNLTKPSDLSTLKVNINKQKKDAFQILKPELDVDPESNPHYDERMGI
NKTKLLRPKRMSFLFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINP
NLIEVSERVVKDKTKEPIPEIEWWDVPLLHSGTYEHVGDGFVADDKIRKDKITIYVEHPR
PIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLM
KVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFEDTNSLET
IVSVYKINDLSHPQARFKVDVNARENRLSGCAVICDNISVLVVEGGSKSIKRYGKLMLKR
INWAASVKEEEEEDENDDKPVNKCSLVWQGSVAKSSFHKFSIQECMTEAAARKIFADAGV
GHYWDLAVNFSDDLI
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atggacagggttaccgagaaggagagatcaagcaagcgttctcgtgaagaacgcaatggt
gaccacaagcatcgaagtcgagacgccgaggaaaaacatttctccaaggatgaaaagcac
cgtgaatccgatcactcccatcgtcggcgtcaccatcggtcggaccgtgattcaaagctt
gagcgttcgcatgagtcgcgcgatctcaaacatcggcgggataggtctcccgatgattgt
gagagctcccaagatcgagattttaagcgggaaagatcttatgacgttcgggatgagaga
gagaggagtagagatagggtctcgtccaagcgagagcggtcgagtgagccgagaggggag
agagagggcagcaaggagaggggcaagctacgcgaggttaggcgcgagcagtcggacgat
gagtatgaacgggaagactcattggggccaatccagaattttgtacgttcttcaaacaag
aggaaggagaggggaggaagtgaggataggtttgatggtggtgagaagagggctagggct
tcagaagatgggaaggatcttagacgaaatgaagacgggaaggaagtgaatggagctgag
atggatgacagaaaggagcggaggagatttgctgacggtgagaaagatgatgaagcaaac
atgagtggtaggggaaagagggagaggaagcggtttggggatcgggcgaaggaagaggat
aatggtggaaatgttgatgggaaagttcaggttggaggcacctctgatgaaagaaggtcc
acggggaatggatctacggtggaacatattgacatgtcatcaagtgtgccccagaatttg
ttacatcctggttattcccatcctatcaaggtatcttcaatttctaccacaaatgaaaat
aagggagttagtattgccagatctcatgaggttcatggaaaatctagtacagatgggaca
tcttcaaccgcggggaaaagtggaaatctctctcttgatgctttagcaaaagctaagaaa
gctttacagatgcagaaagaattggccgagaagttgaagaaaattcccttgatgaagaag
gatgggtggtcaagttctgcaagtagctcagctgtaaaatcggaggagaaagctaagcta
gcaggtggtttattggggctaacggcaactacaaatgtcaccactaccctttctgctggg
gtagcatcaagtttgtcgaccttaccagctgccaatgcacttggtggtggtattaatgtt
ccagctagccttacctctataccccattttgaagctgtcaaacgtgcacaggagcttgct
gccaggatgggatttcgccaggatccagagtttgctcctcttataaatttgtttccaggg
aatgtagcaactgatgttgctgtttcacagaagccaagcaaggctcctgtgcttcgcctt
gatgcactcggcagggaaatagacgaacaaggaaatgttgtcaatttaaccaaacccagc
gacctcagcactctaaaggttaacatcaacaaacagaaaaaggatgcatttcaaattctt
aaacctgaacttgatgtggatcccgaatcaaatcctcattatgatgagaggatgggtata
aataaaactaaactgttaaggccaaagaggatgagtttcctgttcgttgaggaggggaaa
tggtccaaggaggctgaaaccataaaattaaggagtaaatttggagaggcacaagccaaa
gaacgaagggagaagcaggcacaattggccaaggccaaggctgcacctgatataaatcca
aatctgatcgaggtatcggagagagttgtgaaagataaaacaaaagaaccaattcctgag
atcgagtggtgggatgtccctcttttgcattctggcacatatgagcatgtgggagatggt
tttgtggctgatgataaaataaggaaggataagattaccatatatgtggagcatcctcgt
cctattgaacctcctgctgaaccagctcctccgcctcctcaacccctaaagctaacaaag
aaggagcagaaaaaactccgtacgcagcgtcgtctggcaaaggagaaagatagacaggag
atgattagacaaggcctgatagaaccacctaaaccaaaagttaaaatgagcaatttaatg
aaagttcttggctcagaagcaacccaagaccctacaaaacttgagaaagagattcgtgct
gcagctgctgagagggaacaagctcacatagatagaaatattgcacgaaaactgacccca
gcagaacgccgtgaaaagaaagaacgcaagctttttgaggatacaaattcactggagaca
attgtatccgtttacaagatcaatgatttatcacacccacaggcccggtttaaagttgat
gttaatgctagagagaaccgtttgagtggatgtgctgtgatatgtgacaacatcagtgtt
ttggtcgttgaagggggcagcaaatccatcaagaggtatgggaaacttatgcttaagcgc
ataaactgggccgcttccgtgaaagaggaagaagaggaggatgaaaatgacgacaagccc
gttaataaatgttcattggtatggcaaggaagtgttgccaaatctagcttccataaattt
tctatccaggagtgcatgacggaggcagctgctaggaagatttttgctgatgctggtgtt
ggtcattattgggatctcgccgttaacttttctgatgatctaatataa
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