KEGG   Cucurbita maxima (winter squash): 111477318
Entry
111477318         CDS       T05246                                 
Name
(RefSeq) protein RDM16-like isoform X1
  KO
K12843  U4/U6 small nuclear ribonucleoprotein PRP3
Organism
cmax  Cucurbita maxima (winter squash)
Pathway
cmax03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cmax00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111477318
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cmax03041]
    111477318
Spliceosome [BR:cmax03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    111477318
SSDB
Motif
Pfam: PRP3 Prp3_C
Other DBs
NCBI-GeneID: 111477318
NCBI-ProteinID: XP_022977165
UniProt: A0A6J1ILJ1
LinkDB
Position
Unknown
AA seq 915 aa
MDRVTEKERSSKRSREERNGDHKHRSRDAEEKHFSKDEKHRESDHSHRRRHHRSDRDSKL
ERSHESRDLKHRRDRSPDDCESSQDRDFKRERSYDVRDERERSRDRVSSKRERSSEPRGE
REGSKERGKLREVRREQSDDEYEREDSLGPIQNFVRSSNKRKERGGSEDRFDGGEKRARA
SEDGKDLRRNEDGKEVNGAEMDDRKERRRFADGEKDDEANMSGRGKRERKRFGDRAKEED
NGGNVDGKVQVGGTSDERRSTGNGSTVEHIDMSSSVPQNLLHPGYSHPIKVSSISTTNEN
KGVSIARSHEVHGKSSTDGTSSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK
DGWSSSASSSAVKSEEKAKLAGGLLGLTATTNVTTTLSAGVASSLSTLPAANALGGGINV
PASLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNVATDVAVSQKPSKAPVLRL
DALGREIDEQGNVVNLTKPSDLSTLKVNINKQKKDAFQILKPELDVDPESNPHYDERMGI
NKTKLLRPKRMSFLFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINP
NLIEVSERVVKDKTKEPIPEIEWWDVPLLHSGTYEHVGDGFVADDKIRKDKITIYVEHPR
PIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLM
KVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFEDTNSLET
IVSVYKINDLSHPQARFKVDVNARENRLSGCAVICDNISVLVVEGGSKSIKRYGKLMLKR
INWAASVKEEEEEDENDDKPVNKCSLVWQGSVAKSSFHKFSIQECMTEAAARKIFADAGV
GHYWDLAVNFSDDLI
NT seq 2748 nt   +upstreamnt  +downstreamnt
atggacagggttaccgagaaggagagatcaagcaagcgttctcgtgaagaacgcaatggt
gaccacaagcatcgaagtcgagacgccgaggaaaaacatttctccaaggatgaaaagcac
cgtgaatccgatcactcccatcgtcggcgtcaccatcggtcggaccgtgattcaaagctt
gagcgttcgcatgagtcgcgcgatctcaaacatcggcgggataggtctcccgatgattgt
gagagctcccaagatcgagattttaagcgggaaagatcttatgacgttcgggatgagaga
gagaggagtagagatagggtctcgtccaagcgagagcggtcgagtgagccgagaggggag
agagagggcagcaaggagaggggcaagctacgcgaggttaggcgcgagcagtcggacgat
gagtatgaacgggaagactcattggggccaatccagaattttgtacgttcttcaaacaag
aggaaggagaggggaggaagtgaggataggtttgatggtggtgagaagagggctagggct
tcagaagatgggaaggatcttagacgaaatgaagacgggaaggaagtgaatggagctgag
atggatgacagaaaggagcggaggagatttgctgacggtgagaaagatgatgaagcaaac
atgagtggtaggggaaagagggagaggaagcggtttggggatcgggcgaaggaagaggat
aatggtggaaatgttgatgggaaagttcaggttggaggcacctctgatgaaagaaggtcc
acggggaatggatctacggtggaacatattgacatgtcatcaagtgtgccccagaatttg
ttacatcctggttattcccatcctatcaaggtatcttcaatttctaccacaaatgaaaat
aagggagttagtattgccagatctcatgaggttcatggaaaatctagtacagatgggaca
tcttcaaccgcggggaaaagtggaaatctctctcttgatgctttagcaaaagctaagaaa
gctttacagatgcagaaagaattggccgagaagttgaagaaaattcccttgatgaagaag
gatgggtggtcaagttctgcaagtagctcagctgtaaaatcggaggagaaagctaagcta
gcaggtggtttattggggctaacggcaactacaaatgtcaccactaccctttctgctggg
gtagcatcaagtttgtcgaccttaccagctgccaatgcacttggtggtggtattaatgtt
ccagctagccttacctctataccccattttgaagctgtcaaacgtgcacaggagcttgct
gccaggatgggatttcgccaggatccagagtttgctcctcttataaatttgtttccaggg
aatgtagcaactgatgttgctgtttcacagaagccaagcaaggctcctgtgcttcgcctt
gatgcactcggcagggaaatagacgaacaaggaaatgttgtcaatttaaccaaacccagc
gacctcagcactctaaaggttaacatcaacaaacagaaaaaggatgcatttcaaattctt
aaacctgaacttgatgtggatcccgaatcaaatcctcattatgatgagaggatgggtata
aataaaactaaactgttaaggccaaagaggatgagtttcctgttcgttgaggaggggaaa
tggtccaaggaggctgaaaccataaaattaaggagtaaatttggagaggcacaagccaaa
gaacgaagggagaagcaggcacaattggccaaggccaaggctgcacctgatataaatcca
aatctgatcgaggtatcggagagagttgtgaaagataaaacaaaagaaccaattcctgag
atcgagtggtgggatgtccctcttttgcattctggcacatatgagcatgtgggagatggt
tttgtggctgatgataaaataaggaaggataagattaccatatatgtggagcatcctcgt
cctattgaacctcctgctgaaccagctcctccgcctcctcaacccctaaagctaacaaag
aaggagcagaaaaaactccgtacgcagcgtcgtctggcaaaggagaaagatagacaggag
atgattagacaaggcctgatagaaccacctaaaccaaaagttaaaatgagcaatttaatg
aaagttcttggctcagaagcaacccaagaccctacaaaacttgagaaagagattcgtgct
gcagctgctgagagggaacaagctcacatagatagaaatattgcacgaaaactgacccca
gcagaacgccgtgaaaagaaagaacgcaagctttttgaggatacaaattcactggagaca
attgtatccgtttacaagatcaatgatttatcacacccacaggcccggtttaaagttgat
gttaatgctagagagaaccgtttgagtggatgtgctgtgatatgtgacaacatcagtgtt
ttggtcgttgaagggggcagcaaatccatcaagaggtatgggaaacttatgcttaagcgc
ataaactgggccgcttccgtgaaagaggaagaagaggaggatgaaaatgacgacaagccc
gttaataaatgttcattggtatggcaaggaagtgttgccaaatctagcttccataaattt
tctatccaggagtgcatgacggaggcagctgctaggaagatttttgctgatgctggtgtt
ggtcattattgggatctcgccgttaacttttctgatgatctaatataa

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