Cucurbita maxima (winter squash): 111477778 Help Entry 111477778         CDS       T05246                                  Name (RefSeq) pre-mRNA-splicing factor SYF1   KO K12867   pre-mRNA-splicing factor SYF1 Organism cmax  Cucurbita maxima (winter squash) Pathway cmax03040   Spliceosome Brite KEGG Orthology (KO) [BR:cmax00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     111477778  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cmax03019]     111477778    03041 Spliceosome [BR:cmax03041]     111477778 Messenger RNA biogenesis [BR:cmax03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Other transport factors      111477778 Spliceosome [BR:cmax03041]  Complex B   Other components    Prp19-related factors     111477778  Complex C     111477778 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_N HAT_PRP39_C TPR_14 Suf Mad3_BUB1_I TPR_15 TPR_19 ARM_TT21_C ARM_TT21 Motif Other DBs NCBI-GeneID:  111477778 NCBI-ProteinID:  XP_022977433 UniProt:  A0A6J1IPZ1 LinkDB All DBs Position Unknown AA seq 912 aa AA seqDB search MSISQDLYPSQDDLLYEEELLRNPFSLKLWWRYLIARAESPFKKRFIIYERALKALPGSY KLWYAYLRERLDLVRNLPITHSQYETLNNTFERALVTMHKMPRIWIMYLQTLTNQKLVTR TRRTFDRALCALPVTQHDRIWEPYLVFVSQKGIPIETSLRVYRRYLKYDPTHIEDLIEFL VNSNLWQEAAENLASVLNDDQFYSIKGKTKHRLWLELCDLLTRHATEVSGLNVDAIIRGG IRKYTDEVGRLWTSLAEYYIRRNLHEKARDIFEEGMTTVVTVRDFSVIFDSYSQFEESML AHKMENMDLSDEEDEAQENGLEEEEEEDIRLDLDLSVSKFEKKILLGFWMYDDNDIDLRL ARLDHLMDRRPELANSVLLRQNPHNVEQWHRRIKLFEGNPTRQILTYTEAVRTVDPMKAV GKPHTLWVAFAKLYETHKDLPNARVIFDKAVQVNYKTVDNLASIWCEWAEMELRHKNFKG ALELMRRATAEPSVEVKRKVAADGNEPVQMKVHKSLRLWTFYVDLEESLGTLESTRAVYE RILDLRIATPQIIINYALLLEEHKYFEDAFKVYERGVKIFKYPHVKDIWVTYLSKFVKRY GKTKLERARELFEHAVETAPADSVRPLYLQYAKLEEDHGLAKRAMKVYDQATKAVPNNEK LSMYEIYIARAAEIFGVPKTREIYEQAIESGLPDQDVKTMCLKYAELEKSLGEIDRARGI YVFASQFADPRSDLNFWNKWHEFEVQHGNEDTFREMLRIKRSVSASYSQTHFILPEYLMQ KDQTLNLDEAKDKLKQAGVTEDEMAALERQLAPAIEDSAKDNSRKVGFVSAGVEESQADG VSKVTAHQEDIELPDESDTEEDEKVEIAQKEVPSAVFGGLARKKEDTDETNREKDDDSHL GALERIKRQKKA NT seq 2739 nt NT seq  +upstreamnt  +downstreamnt atgtcgatttcccaagatttatatccgtcgcaagatgaccttctctacgaggaagagctt cttcggaatccttttagtttgaagttgtggtggcgctacctcatagcacgagcagaatca ccattcaagaagcggttcattatttacgagcgagctctgaaagccctcccgggtagctat aagttatggtatgcatatctgcgagaacgcctcgatctggtacgaaatcttcccattact cattctcagtacgaaactcttaataacacgtttgaacgagcgcttgtgaccatgcataaa atgcctagaatatggataatgtacctacaaactttgacgaatcaaaaattagtgacccga acgcgtcggacgtttgaccgagccctttgtgcccttccagtgacacaacatgatcgcatt tgggagccatacctcgtttttgttagccaaaagggtattccaattgagacctcgcttaga gtttatcgaaggtatttaaaatatgatccaacacatattgaagacttgattgaatttttg gttaattcaaatctgtggcaagaagctgctgagaatttggcttcggtgttgaatgacgat caattttattctattaaggggaagaccaagcatcggctgtggttagagttgtgtgatttg ctcactagacatgccactgaggtttcagggttgaatgttgatgctataatacggggcggc attaggaagtacactgatgaagtagggcgcttatggacatcgcttgcagaatattacatc agaaggaatttgcacgagaaggcaagagatatatttgaagaggggatgactactgttgtt acggtaagagattttagtgtgatatttgattcatactctcaattcgaggagagtatgcta gctcataaaatggaaaatatggatttgagtgatgaggaagatgaagcacaggaaaatggt ctcgaggaggaggaggaagaggacatccgattagatcttgatttatcagtttctaagttt gagaagaagatacttctagggttttggatgtacgatgataatgacattgatttaaggcta gctaggttagaccatctaatggacagaagaccagaattagctaatagtgttcttctacga caaaatcctcataatgtcgaacaatggcatcggaggattaaattatttgagggcaatccg acaagacagatattgacgtatactgaggctgtgagaacagtggatcccatgaaagcagta ggtaagcctcataccctgtgggttgcttttgctaagctgtatgaaacccacaaagatctt ccaaatgcaagagttatttttgacaaagctgtacaagttaactacaagactgtggataac ttggctagcatttggtgtgaatgggcggaaatggaattgaggcataaaaattttaaagga gctctcgagctcatgcgtcgagctacagcagagccgtctgttgaagtcaaacgaaaagtg gctgctgatggtaatgaaccggtccagatgaaggtccacaagtccctaagactttggacc ttttatgtggatttggaagaaagtcttggaaccttggagtctacccgtgcagtttatgag cgaatactagacttaagaattgctaccccacaaataataatcaactatgctttgcttctt gaggaacacaagtacttcgaagatgcattcaaggtttatgaaagaggcgtcaagattttc aaatatcctcatgttaaagatatatgggttacatatctatccaagtttgtaaaaagatat gggaagacaaaattggagcgagcaagagaactatttgagcatgcggttgaaacggcaccc gctgattcagttaggcctttgtatcttcaatatgcgaagcttgaggaagaccatggtttg gcaaagcgagctatgaaggtctatgatcaggcaactaaagctgttccaaataatgagaaa ttgagcatgtatgaaatatacattgcccgtgcagccgagatatttggtgttcctaaaact agagaaatctatgaacaagcaatagaatctggtcttcctgatcaagatgtgaagaccatg tgcttgaagtatgctgagctggagaagagtttgggagaaattgatcgtgctcgtggaata tatgtatttgcttcacagtttgcagacccgagatcagatttgaacttttggaacaaatgg cacgagtttgaggtccaacatggaaatgaagatacttttagagagatgcttcgtatcaaa aggagtgtttctgctagctatagccagacacattttatactgccggagtatctaatgcaa aaggatcagacactgaaccttgacgaggcaaaagacaaattgaagcaggctggggttaca gaagacgaaatggctgctcttgagaggcagttggccccggcaattgaagactcggccaaa gataacagccgtaaagttggttttgtgagtgctggagtggaggaatcacaagctgatgga gtatcaaaggtcactgctcatcaagaagacattgaattgccagatgaaagtgacacggaa gaagacgagaaggttgaaattgcccagaaagaagtcccatctgcagttttcggaggcctt gctcgaaagaaggaagataccgatgagaccaacagagaaaaggatgatgacagccatctt ggtgcgcttgagagaataaaaaggcaaaaaaaagcttag

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