Cucurbita maxima (winter squash): 111477856
Help
Entry
111477856 CDS
T05246
Name
(RefSeq) small RNA degrading nuclease 3-like
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
111477856
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cmax03009
]
111477856
Ribosome biogenesis [BR:
cmax03009
]
Eukaryotic type
Pre-60S particles
RNases
111477856
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
CofD
Motif
Other DBs
NCBI-GeneID:
111477856
NCBI-ProteinID:
XP_022977561
UniProt:
A0A6J1IKA1
LinkDB
All DBs
Position
Unknown
AA seq
521 aa
AA seq
DB search
MEDKISTAEKKVLVEMVRLTQKRGMRGSEGDWKEFLISRDPKFGASMCDPSKRPNDLLIA
FLKTFSKEDDLMFLDKILQCNEKRNVVKQVSQKTSDNESPEQRLVRLTLEHPQYPLEYSF
PSYEKGWIVTKFSQKSKALKSNAIYAIDCEMVLCEDGTENLVRVCMVDRDLQVKIDELVN
PRKAIKDYRTDITGISPGDLDGVTCSLVDVQRSITKLLSHGTILAGHSLNNDLQALKLDH
TRVIDTSFIFKYSNGSIYRRPSLNKLCKSVLGYDLREEGASHNCLDDARAAMKLVLAKLE
SKADDVIAIVDEDTPQIGMEKLLLHRIPINVPSEALAGVIPGDFTIELKPPKRGQGGDIY
SAFAVFKNSKEARQAFEQIEGNPNEDSSGRPQKLVRFQRSGSIVSIFVRTMGANDFAEKV
SSRKRDLEVIESLVMSKKQKTDQKIEMETISNSSRCCNHVEEVERLKQELKQKEDSSHCC
DHLKEVESLKEDLRRKDYELSILRKAITVGKKENRKRKGKK
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggaggacaagatctctacagcagagaagaaggtgcttgtcgagatggtgcgtttgacc
caaaagcgaggaatgagaggtagtgaaggagactggaaggagtttcttatcagtcgtgac
cctaagttcggggctagcatgtgcgacccgtctaagaggcccaatgatttgttgattgct
tttctcaagacatttagcaaagaggatgatttgatgttcttggataaaattctccagtgt
aacgagaagcgcaatgttgtgaagcaagtatcgcagaaaacttccgacaatgaatcaccc
gagcagaggctggttcggcttacactcgaacacccacagtatccattagaatattcattc
ccatcatatgagaagggatggattgttacaaaattcagtcaaaagtctaaagcactgaag
tcaaatgcaatatatgccattgattgtgagatggttctctgcgaagatggaactgagaac
ttggtgagggtttgcatggtggatcgcgacttacaagtgaaaattgatgaacttgtaaat
cctagaaaagcaattaaggactacagaactgatataactggaatttctccgggggatttg
gatggagttacttgttctttggttgatgttcagagatccattacaaaattattgtcacat
ggaactattttggcaggccacagtctgaacaatgacctgcaagcacttaaattagatcac
acgagggtgattgacacttcatttatcttcaagtattccaatggatctatctatagaaga
ccttctttgaataagctgtgtaagtctgtcttgggctatgatcttcgggaggagggtgct
tcacataattgtctggatgatgctcgtgctgccatgaaacttgttctcgcaaaacttgag
agtaaagctgatgatgtgattgctatagttgatgaggatacacctcaaattggtatggag
aagttacttcttcatcgaataccgattaatgtaccaagtgaagcattagctggagttatt
cctggtgacttcaccattgaactcaagccacctaagagaggtcaagggggggatatatac
tctgcatttgcggtttttaagaattccaaggaggcacgacaagcattcgaacagattgaa
ggtaacccaaatgaggactcatctggacgcccacaaaagcttgtcaggtttcaacgttca
gggtccattgtcagtatctttgttcgcacaatgggagcaaatgattttgctgaaaaagta
tcatcgagaaagagggacctagaggtgattgaaagcctagtaatgtccaaaaaacagaag
actgaccagaaaattgaaatggagacaatttcaaactcgagtagatgttgcaaccatgtg
gaggaggttgaaaggttgaagcaagaattgaaacaaaaggaggactcgagtcactgttgt
gatcacttgaaagaggttgagagcctgaaagaagacttgagaaggaaggattatgaactt
agtatcctgcgtaaagctatcaccgtggggaagaaggaaaacaggaagagaaaaggaaag
aagtaa
DBGET
integrated database retrieval system
