Cucurbita maxima (winter squash): 111477866
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Entry
111477866 CDS
T05246
Name
(RefSeq) vacuolar protein sorting-associated protein 54, chloroplastic-like isoform X1
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
cmax
Cucurbita maxima (winter squash)
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cmax01009
]
111477866
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmax04131
]
111477866
Protein phosphatases and associated proteins [BR:
cmax01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
111477866
Membrane trafficking [BR:
cmax04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
111477866
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
111477866
NCBI-ProteinID:
XP_022977576
UniProt:
A0A6J1IKB8
LinkDB
All DBs
Position
Unknown
AA seq
1026 aa
AA seq
DB search
MESQPSQSGRSPTDYSSLISRETRLDRTTSSPSAKSNTDASSQSLSSILNNPHAGKSDAS
WVGWWSSPSTMSPPEFMPLASTIASSEVTRLDFNSYTAVISDPFNRFEDIRNHSSKEDGG
LDSIGGQGEALVACLREVPALYFKEDFALEDGATFRAACPLLNVSQNFVLQEKLSHYLDV
VELHLVKEISLRSNSFFEAQGQLQDLNVKIVEGCSRIRQLKETIRLLDVDLVDSAREIQA
QNATRNNLLALQHKLKLILYVNQAISALKLLVASADCAGALDVTDDLLHLLEGDELAGLH
CFRHLRDHVAASIESITSILSAEFMRASIHDAGDVDIVITTETRARASNLMNGKDEQVKL
DEEETSNFCDHLLPIIIGLLRTAKLPSVLRLYRDAVTADMKTAFKNAVAELLPVLLLRPL
DSDFAPGERTVDADGGGASLASKLRGLSSEGFVQLLSAILKIVQVHLVRAAEVKKSIGWI
MCNLDGHYAADSVAAAIVIGAAASGTAQDSDNQGGLLLPHLPQQAAAKVTSSQGKENEAA
NPSNMSRNFRADVLRENTEAVFAACDAAHGRWAKLLGVRTLVHPKLRLQEFLSIYNITQD
FITATEKIGGRLGYSIRGTLQSQAKAFVDFQHESRMTKIKAVLDQETWVEVDVPDEFQTV
AESICSQELLSEKVEHAQGNMDRSYSDVAANNDDSRIVGGESLNAQQNSEQIDSSDMSGG
NTAHVKPTPADTVEKSNADVTNTTTQVNNNNVKERGKSSSKTLQYKGVGYHMVNCGLILL
KMLSEYIDMNDSLPALSSEVVHRVVEILKFFNTRTCQLVLGAGAMQVSGLKSITSKHLAL
ASQVISFTFAIVPEIRRILFLKVPEARKTMLLSEIDRVALDFKVHRDEIHTKLVQIMRER
LSVHLRGLPQIVESWNRPENSDPQPSQFARSLTKEVGYLQRVLSRTLHEADVQAIFRQVV
KIFHLQISEAFSRLDISTPQSKDRLLRDVKHILGCIRSLPDSSKPDIPNWGQLDEFFDQR
FGSEAG
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atggagtcccagccttcccaatcgggaaggtccccgactgactattccagcctcatcagt
agagaaacgagacttgatcgaactacttcctccccctccgctaaatccaacaccgatgcc
agcagccagagcttgtcttcaattctcaacaacccgcacgctggcaaatccgatgcgtcg
tgggttggctggtggtcatccccgtccaccatgagcccacctgagttcatgcccctggct
tccaccatagcctcatccgaagttactcgattggattttaacagctacacggctgtgatc
tcggatccttttaatcgattcgaggatatacggaaccattccagcaaggaggacggtggc
ttggatagcattgggggccaaggcgaggcccttgtggcatgtctgagagaggttccagcg
ctttactttaaggaagatttcgctttggaggacggggcaacattccgtgcagcgtgcccc
ctcttgaatgtatcgcagaattttgtgctgcaagagaagctttcgcattatttagatgtg
gtggagttgcatttagtgaaggaaatttcactgcgttccaattctttcttcgaggctcag
gggcagctacaagacttaaatgtcaagatagtggaggggtgtagccggatacggcaatta
aaggagaccatacggctcttggatgttgatttagtggattctgccagggaaattcaggcg
cagaatgcgaccaggaacaatttgttggctcttcagcacaaattgaagcttattttatat
gttaatcaggccatttcagctcttaaattgctagtagcatcagcagattgtgctggagct
ctggatgtgactgatgatttactacatcttctggagggtgatgaacttgctggtctgcat
tgctttcgtcacctacgtgatcatgtagcagcatcaattgaatccataaccagcattctt
tcagcagagtttatgcgtgcctcaattcatgatgctggagatgtagatatcgtaattaca
actgaaacaagagcaagggcttcaaatttaatgaatggaaaggatgaacaggtcaagttg
gacgaggaagaaacctccaacttttgcgatcatcttcttcctattatcattgggttgctt
aggaccgccaagcttccctctgtattgaggttatatcgtgatgcagttacagctgatatg
aaaactgcttttaagaatgcagtggcagaactacttcctgttcttctactcagacctcta
gactcagattttgcacctggagagagaacggtagatgcagatggtggaggtgcgtcgctt
gcaagcaagctgaggggcctctcatctgaaggctttgttcaacttttaagtgccattttg
aagattgtacaggtacatttggtgcgtgctgcagaagtgaaaaagtctattggatggatt
atgtgcaaccttgatgggcattatgctgcagattcagttgctgctgcaattgttattggt
gctgcagcttctggtacagctcaagatagtgataatcaaggtggtttgcttcttccacat
ttacctcagcaagcagctgccaaggttacttcctcacagggaaaggaaaatgaagcagca
aatccttcaaatatgtctagaaatttcagagctgatgtactgcgagaaaatacggaagct
gtttttgcagcttgtgatgctgctcatggaagatgggctaaactccttggagttcgcact
cttgttcatccaaagttaagattgcaagagtttttaagcatatacaacattacacaagat
tttattactgccactgaaaagataggtggaaggttgggatatagcattcgtggaacttta
cagtcccaggccaaagcttttgttgattttcagcatgaatctcgtatgacaaaaataaag
gcagtgcttgatcaggaaacatgggttgaagtggatgttcccgatgaatttcaaactgta
gctgaatcaatatgttctcaggagctgctttctgaaaaagttgagcatgctcagggtaat
atggatcgaagctacagtgatgtggctgcaaataacgatgattcacgcattgtaggtggt
gaatctctcaatgctcaacaaaactctgagcagattgattcaagtgacatgtctgggggg
aatactgcacatgtgaagcctactcctgcggatacagttgaaaagagtaatgctgatgtc
acaaatactacgacacaggttaacaataataatgtgaaggaacgtggaaaatcgagttct
aagactttgcaatacaaaggcgttggttatcatatggtaaactgtggtttgatcttgctc
aagatgttgtcggagtacattgacatgaacgattctcttccagcactatcttccgaagtc
gtacatcgtgttgtggaaattctcaagtttttcaatacaaggacgtgtcaacttgttctt
ggagctggggctatgcaggtgtctggtttgaagtctatcacatcaaaacacttggccctg
gccagtcaagttatcagttttaccttcgccattgttcctgaaattaggaggatccttttt
ctcaaggtacccgaggcacgaaagacaatgttactctcagagattgatcgagtggctcta
gatttcaaagttcaccgagatgaaattcatactaagctggtccagataatgagggaaagg
ttatcggtacatcttcgtggcctgcctcaaattgttgaaagttggaataggcccgagaat
tctgaccctcagccgagtcagtttgctcgatcacttaccaaggaagttgggtaccttcag
cgtgtcttatctcgaaccttacatgaggctgatgttcaggcaatatttaggcaagtggtg
aaaatcttccatttacaaatttctgaagcattttcacgattagacataagcaccccacaa
tcaaaggataggctgcttcgtgatgttaagcacattcttggctgcataagatctttgccc
gactcgagtaaacctgacatcccaaactgggggcaacttgatgaattctttgatcaaaga
ttcggatctgaagctggataa
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