Cucurbita maxima (winter squash): 111478106
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Entry
111478106 CDS
T05246
Name
(RefSeq) transport inhibitor response 1-like protein Os04g0395600 isoform X1
KO
K14485
transport inhibitor response 1
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
111478106
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmax04121
]
111478106
Ubiquitin system [BR:
cmax04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
111478106
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
111478106
NCBI-ProteinID:
XP_022977973
UniProt:
A0A6J1ISU2
LinkDB
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Position
Unknown
AA seq
586 aa
AA seq
DB search
MSSKRKKKGGSGDSDESTRAGSIFPDEVLERVLSLVKSRKDRSSVSLVCKDWFNAERWSR
THVFIGNCYSVSPEIVIRRFPNIRSVSLKGKPRFSDFNLVPPNWGADIHSWLVGFASKYP
NLEELRLKRMTVTDESLEFLGRSFPNFKALSMMSCDGFSTDGLAAIATHCKNLTELDILE
NDINDKSGNWLSCFPDTLKSLQVLNFASLNSDVSFESLEKLVKRCKSLKVLKVNRNINLE
QLQRLLVNAPQLTELGTGSFSQDLTLRQYYDLEDAFKSCNNLHTLSGLLESTVLYLQVLF
PASANLTFLNLSYAILHSGELAGLLSHCPVLRRLWVLDTVEDKGLKAVGLSCPLLEELRV
FPADPYADNLVHGVTESGFLAVSYGCPKLHYVLYFCHQMTNEAVATIVQNCPDFTHFRLC
IMNPHQPDYLTKQPMDEAFGAVVKTCSKLRRLAISGLLTDITFEYIGKYAKNLETLSVAF
AGSSDWGMQCVMSGCPKLRKLEIRDSPFGNAALLSGLERYESMRSLWMSACKVTMNGCRI
LAKQVPRLNVEVIKDGGSDECEAESVYVYRSVAGPRRDAPSFVLTL
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgaagaggaagaagaagggggggtcaggggactcggacgagtcgactcgggct
ggttccattttcccagatgaggtattggaaagggttctgagtttggttaagtctcgaaaa
gatagaagctctgtttccctggtttgtaaagattggttcaacgccgagcggtggtctcga
acccacgttttcatcgggaactgttactctgtttcaccggaaattgtaatccgacggttc
ccgaacattcggagtgtgtcgttgaaggggaaacccaggttttcggatttcaatttggtg
cctccgaattggggagctgatattcattcatggcttgtcggcttcgcttcaaaataccca
aatctcgaagagttgaggctcaaaagaatgactgtaactgacgagagcttggagtttttg
ggtcgttcgttccctaatttcaaagctctttcaatgatgagctgcgatgggttcagcacc
gatgggcttgcggccattgccactcactgcaagaacttgacggagctggacatacttgag
aatgacatcaatgacaagagtggaaattggttgagttgcttcccagataccttgaaatct
ctgcaagtactcaactttgcaagtttgaacagcgacgtcagttttgagtcccttgagaag
ctggtaaaaaggtgcaaatcattgaaggttttgaaggtcaataggaatataaacttagaa
caattacagaggctgcttgttaatgctcctcagttaacagagttaggcaccggctctttc
tctcaagacctcactctccggcagtactacgacctcgaagatgcctttaaaagttgcaac
aatcttcatactctctcgggcttattggagtccacagtgttgtatctccaagttcttttt
cctgcctctgccaacttaactttcttgaatctcagctacgccattctgcacagtggtgaa
cttgctggtcttctttcccactgccccgtcctccgccgcctttgggttttagacacagtt
gaagacaagggcctgaaggctgttggactcagctgccccttgctagaggaactgcgtgta
tttccagcagatccgtatgctgacaatttagttcatggggtaacagagtctgggtttctt
gctgtctcttatggctgccctaaactccattacgttctctacttttgtcatcagatgaca
aacgaggctgtagccaccattgtgcagaactgcccagatttcacccattttcgtctctgt
attatgaacccccaccaacctgactatcttacaaagcaaccaatggacgaggcctttggt
gccgtggtgaaaacatgctctaagctacgtagactagccatttcgggtttgctaacagac
ataacatttgaatacatagggaaatatgcaaaaaacttggaaactctttcagtggctttt
gctggaagcagcgactggggaatgcagtgtgttatgagtggttgtccaaagctgagaaaa
ctggaaatcagagacagtccatttggaaatgctgctttgctttctggtttggaaaggtat
gaatccatgagatctctatggatgtcggcctgtaaggtgacgatgaatgggtgtcgaatt
ttggcgaagcaggtgccgaggttgaacgttgaggttattaaggatggtgggagtgatgaa
tgtgaggctgaaagtgtttatgtataccgctccgttgcaggtccgagaagggacgccccg
tctttcgttctcaccctctaa
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