Cucurbita maxima (winter squash): 111478129
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Entry
111478129 CDS
T05246
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
cmax
Cucurbita maxima (winter squash)
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmax03041
]
111478129
Spliceosome [BR:
cmax03041
]
Common components
Common spliceosomal components
General mRNP proteins
111478129
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
Motif
Other DBs
NCBI-GeneID:
111478129
NCBI-ProteinID:
XP_022978009
UniProt:
A0A6J1ISX3
LinkDB
All DBs
Position
Unknown
AA seq
593 aa
AA seq
DB search
MDFDEYDYLEKAVEDQDDKETKKAKKSESERNEKSSRKREVDEEAGSGGRVDEELKVKRS
KSEHENGKEDRDHSGRARDRHRRDREEETDGVKERDRERNRTRDRGSSEKERDRDRDRER
HKEKEKERERDKDRRDKERDRERHKEKDRERDKDRRDKEREREKEKERERREREKRERER
EEERSRRSRSRSVREKEREVDVRENRRMKEKKDMVEPEADPERDQRTVFAYQMPLKATER
DVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLFGQPVMVKP
SEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVELVQLPLD
LESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQENVAKSNDLDD
DEGGGLALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNASAPNQRATSLPQNGQAAVAA
PVLPANFTPPVLQSVGSPSECLLLKNMFDPSMETAPDFDLEIKEDVEEECSKYGHVKHIY
VDKNSAGCVYLQYDTVEAAINAQRAMHLRWFAGRQISVLFMQPQVYEAKFIGA
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggacttcgacgagtatgattacttggagaaagccgtggaggatcaggacgataaggag
acgaagaaggcaaagaagagcgagagtgagaggaacgagaaaagcagcagaaagagagag
gtagacgaggaagctggctctggtggtcgtgtggacgaggagctgaaggtcaagaggtcg
aaaagcgagcatgaaaatgggaaggaggatagggatcactcgggccgagcgagggatcgg
catcgaagagacagagaggaagaaacagatggggttaaagagagggatagagaaaggaac
cgtacgagagataggggtagcagtgagaaggaaagggatagagacagggatagagagaga
cataaggagaaggagaaggagagggagagagacaaggatagaagggataaggagagagat
agagagaggcataaggagaaggacagagagagagacaaggatagaagggacaaggagagg
gagagggagaaggagaaagaaagagaaaggagagaaagggagaagagggagcgggagaga
gaagaggagagatcgaggcgaagcaggagtcggtctgttcgggagaaagaacgtgaagtt
gatgtcagagaaaacaggagaatgaaggaaaagaaagacatggtggagccagaagcagat
ccagagagggatcaaagaactgtatttgcatatcagatgcctttgaaggccacagagaga
gatgtttatgaattcttttcaaaagcgggaaaggtgagagatgtccggctgatcatggac
aggaattctagacggtcaaaaggagttgggtatgttgaattttatgatgcgatgtctgtg
cccatggctattgctctctctggtcaactactttttgggcaacctgttatggttaaacct
tcagaggctgaaaagaatcttgttcaatcaaatacgtctggggcctctggggcaggtcca
tatggagcagtagacaggaaactatatgttggtaatctacattttaacatgactgagact
caccttcgagagatttttgaagcttttggtcccgtggagcttgtccaactacctctcgac
cttgaatcgggtcactgcaagggttttggatttgttcaatttgctcatctagagcatgcg
aaggcagctcaaagcttgaatgggaaattagaaattgcaggccgaaccattaaggtttca
tctgtaacagatcacattggagcacaagagaacgttgcaaaatcaaatgaccttgatgat
gatgaagggggtggtctggcattgaatgctcaatcaagagctctgcttatgcagaagctt
gaccgcactggcattgctaccagtattgcaggatctcttggagctccagtgttgaatgcg
tcagccccaaatcagagagctaccagcttgccacaaaatggtcaagctgcagttgctgca
ccagtacttccagcgaattttactccacctgttttgcaatctgttggaagtcctagtgaa
tgcctactactgaaaaacatgtttgatccatcgatggagacagcaccagactttgacttg
gaaatcaaagaagatgttgaagaggagtgttctaaatatggccatgttaagcatatatat
gtggataaaaatagtgcgggatgtgtgtatctgcaatatgatacggtggaagctgctatt
aatgctcaacgtgcaatgcacttgagatggtttgcaggcaggcagatatcagtcttgttc
atgcaaccgcaggtgtatgaagccaagtttataggagcttga
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