Cucurbita maxima (winter squash): 111478169 Help Entry 111478169         CDS       T05246                                  Name (RefSeq) protein RRP6-like 2   KO K12591   exosome complex exonuclease RRP6 [EC:3.1.13.-] Organism cmax  Cucurbita maxima (winter squash) Pathway cmax03018   RNA degradation Brite KEGG Orthology (KO) [BR:cmax00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     111478169  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cmax03019]     111478169 Messenger RNA biogenesis [BR:cmax03019]  Eukaryotic type   mRNA degradation factors    3'-5' decay     Exosome cofactors      111478169 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DNA_pol_A_exo1 HRDC PMC2NT Motif Other DBs NCBI-GeneID:  111478169 NCBI-ProteinID:  XP_022978083 UniProt:  A0A6J1IRZ7 LinkDB All DBs Position Unknown AA seq 936 aa AA seqDB search MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSQGIPAGKDFHFYYNFDEFKIPIRSIDR QSQSMLETIGSSAEVWGKEMAFPEDNDDAYDWLVNVNDEILERFDVSLDEFQRIRKEEEE ESGRAVALTADADDGFQLVCGKKKKSPSHGDEVHDSFESSVKVATKDRKTLGVKPKVPFH IPTIRRPQDEFNILVNNANQPFEHVWLQRSEDGSRFVHPLEKLSVLDFVDKINEDFQPVY PPSLDCTPFKFIEEVNDLKKLAAKLRRENEFAVDLEHNQYRSFQGLTCLMQISTRTEDFV VDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDIVWLQRDFGIYICNLFDTGQASRVLKL ERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYIYDLMRKKLSSM PHESEESDIPLVEVYKRSYDVCLHLYEKELLTESSYFYVYGLQGSGFNAQQLSVAASLFE WRDIVARAEDESTGYILPNKTLLEIAKQMPVTINKLRRLLKSKHSFIERNLASIVTIIRH SMLNSSAFEEAAERLKEVRTEAASEENTSANEHQETNMPDTSNLRYAIPIVKDSAVDNTA SDQICSSSSQSKVAPLEHGYRPFVPGKCVMVDHSTHPVLNGMGPTTLELGEHSNGDKYPV AQVTGVNITLQKKTNRGGLGSLLGNSAPKRKLDTDKKDKEENKLDKIRSSVTLPFHSFLG TSEQLKSVVEPTTMTTLKTQNSEAPVAESTKTSNIELPAMPVSKPCPTDEIIMLEDDSDD DDEDEDEELHPVAEAATDEPKLKGFSASSPLEIDDDDNNDEPMSLSELSSSFQKCLNSNE QAMNLRETDDSGKQSGFLQIKPFDYEAARKQIEFGEDLEEDSKLEDDKDPKASKIAGLKS DLDLNRVHKNSETVELPQGKRRHAFPATGNRSATFR NT seq 2811 nt NT seq  +upstreamnt  +downstreamnt atggacgtcgatcagtctgattcacagaaggctcagactctgcaatccctaaccagtggt tctctcggctcgtctttgtcgaagctcgccggctcttcccagggtattccggctggcaaa gactttcacttttattacaactttgatgaattcaaaatcccgatacggagcatcgaccgg caatctcagtcgatgctcgagaccattggctcgtcggctgaagtttggggcaaggaaatg gcgttccccgaggataacgatgacgcgtatgattggttggttaatgttaacgatgagatt ttggagcggttcgatgtgtcgctggacgagtttcagaggattcgaaaggaggaggaggag gagagtgggagggcagtggctttgacggcggatgctgatgatgggtttcagttggtgtgt gggaagaagaagaagagtccgagtcatggagacgaggtgcacgattcttttgagtctagt gtgaaggttgctaccaaggacaggaaaactttgggggtgaagccgaaagtgccatttcat ataccgactatccgtagaccgcaggacgagttcaacattttggttaataatgcaaatcag ccatttgagcatgtctggttgcaaaggagtgaagatggctcgcggtttgtacatccactg gagaagctatctgtattggactttgtcgataagattaatgaagattttcaacctgtttat ccaccatctttggattgcactcctttcaaattcattgaggaagttaatgatttgaaaaaa ttggcagctaaattgcgacgggaaaacgaatttgcggttgatttggagcataatcagtat cgatcttttcaaggacttacctgtctgatgcaaatttctacaagaactgaggattttgta gttgatacattgaagcttagaattcatgtggggccctatttgagagaggttttcaaggat ccttcaaagagaaaggtgctgcatggagcagaccgagacattgtgtggcttcaacgggat tttgggatttatatttgcaacttatttgacactgggcaggcttcaagagttttgaaactg gaaagaaatagtctggagtatctccttcatcacttttgtggtgttgcagctaataaagag taccagaatgcagactggagattaagacctcttcctgaggagatgctgagatatgcaagg gaagatacacattatttgctatatatttatgatttgatgaggaagaaactgtcctcaatg ccccatgaatctgaagaatctgatattcctttggtagaggtctacaagcgaagttatgac gtatgcctgcatctttacgagaaggagctgttgacggaaagttcatatttttatgtatac ggattgcagggctctggtttcaatgctcaacagctttctgttgctgctagtctctttgag tggcgagatattgttgctcgtgcagaggatgaaagtactggttacatactgccaaacaaa acgcttctggaaatcgccaagcagatgcctgtcaccattaacaaattacgtagattactg aaatcaaagcattcattcattgagcgcaatcttgcttcaattgtaaccatcattaggcat tcgatgctgaattcaagtgcatttgaagaggctgctgagcgtttgaaggaagtccgtacc gaggcggcatcagaagaaaacacatcagctaatgaacatcaagaaactaatatgcccgat acttcgaatttgagatacgcaatcccaattgtgaaagacagtgctgttgataatactgcc agtgatcagatctgttcgtcctcttctcagtctaaagttgcacccttggaacatggatac cggccctttgtacctggaaaatgtgtaatggtagaccactcaacgcatcctgttctgaat gggatgggcccaacaacattggagctgggtgaacattccaatggcgataaatacccggta gcgcaggttactggagtgaacattacgttgcaaaagaaaactaaccgaggcggtcttggt tcgctattgggaaactcggccccaaagagaaaattagatactgataaaaaggataaggaa gagaacaagttggataaaatccgatcttctgtgactctaccctttcattcattcttggga acgagtgagcaattaaagtcagttgtagaaccaaccaccatgactacattaaaaactcaa aattccgaagcacctgttgccgagtcaacaaaaacctcgaatatagagctacctgcaatg ccagtttcgaaaccctgcccgacagatgagattatcatgttggaagatgattcagatgac gatgacgaagatgaagacgaagaattgcatcctgttgcagaagcagccaccgatgagcca aagttgaaaggttttagtgctagttcacctcttgaaatagacgacgacgacaacaacgac gaaccaatgtctctgtccgaattgtcttctagctttcaaaaatgtttgaattctaatgaa caagctatgaaccttcgagaaactgacgattcaggaaaacaaagtggttttttgcagatc aaaccgttcgactacgaagcagcaaggaaacaaatagaatttggagaagatttggaggaa gactcgaaacttgaggacgacaaagatccaaaggcatcgaagattgctgggttaaagtca gatttagatctgaatagagttcacaagaacagtgaaaccgtggaattaccgcaaggcaaa cgacgccatgccttccctgctaccggaaaccgaagtgcaactttccgctaa

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