Cucurbita maxima (winter squash): 111478176
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Entry
111478176 CDS
T05246
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 2 isoform X1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
cmax
Cucurbita maxima (winter squash)
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cmax01009
]
111478176
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmax03021
]
111478176
Enzymes [BR:
cmax01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
111478176
Protein phosphatases and associated proteins [BR:
cmax01009
]
HAD phosphatases
Fcp/Scp phosphatases
111478176
Transcription machinery [BR:
cmax03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
111478176
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NIF
dsrm
DSRM_2
Motif
Other DBs
NCBI-GeneID:
111478176
NCBI-ProteinID:
XP_022978090
UniProt:
A0A6J1IP39
LinkDB
All DBs
Position
Unknown
AA seq
819 aa
AA seq
DB search
MSRLGFKSVVFHGDVRLGELDAIPATDQNFQFPNNEIRIHRISPPSERCPPLSVLQTISS
FSLRSKLQSSLPVEQPHLIQLHYSCFHELKTAIVLIGDEEIHLVAMPSKQKNFPCFWCFA
VPCGLYLSCLGMLNLRCLSIVFDLDETLIVANTMKSFEDRIEALRLWIGRETDPLRISGM
SAELKRYMDDRSLLKQYIEHDTVNDNGRIFKVQLEEVPPLNGNCEKVVRPIIRLQDKNIV
LTRINPEIRDTSVLVRLRPAWEELRSYLIARGRKRFEVYVCTMAERDYALEMWRLLDPEA
HLIATKQLLDRVVCVKSGSRKSLLNVFQSGSCHPKMAMVIDDRSKVWEDKDQPRVHVVPA
FTPYYAPQAEAASVVPVLCVARNVACDVRGCYFKEFDESLLRRILEISYEDEVADLPPAP
DVSSYLMSEEAGFVSNENVNAPICEGINGVEVERRLNQPDDKHVIDMANNPTTSQTDVRA
DTSQLPPPLNTNVIGPKSSRTLLPSQKPGLLGAPIRRDLSADHDMKRGLLAMKPGIDLRI
PNFGDPPILSRMPVQLPACGLQVQGSSLVDDDSSKGPQNSRSSGLVQESDASKADKPRSS
NNSQVLAGVAISQNRATSNNKEYQTEAGKVTIPPPPSLYIGVLQDIGRRCSSKVEFKTVV
STSKDLQFSVEVLFTGEKIGVGLGKTRKDAQQQAAENALHNLADKYAAHMKPLLGPVDTD
LDKLSIGAENGFLWDTVAPAVNELPKEDVSHKENNSEASDEPGSANSDSANQQQQQHVQK
RLSSPRSFPSKRSREDEVHGPQYLAAASWQQQKNGHSIT
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcttagggttcaaatcggtggtctttcacggcgacgtgcgtcttggggaactc
gacgctattccggcgacagaccagaattttcagtttccgaacaacgagattagaatccac
cgcatatcgccgcccagtgagagatgtcctcccctttcagttcttcagacaatttcttca
ttttctctcaggtctaagctacaatcttccttgcctgttgagcagccgcacttgatccag
cttcactactcctgcttccatgaattgaagacggcaattgtgttgattggggacgaggaa
attcacctggttgcaatgccgagcaagcaaaagaactttccgtgcttttggtgttttgcg
gtgccctgcggcctatatctatcctgtctaggaatgctaaatctcaggtgtctttcaatt
gtttttgatctagacgagacacttattgtggcaaacactatgaaatcttttgaggataga
attgaagctcttcgactttggattgggcgagagacagatccattgcgtatatctggaatg
tctgctgaactcaagcggtacatggatgatcggtcgctgttgaaacagtatattgagcac
gatacagtaaatgataatggaaggattttcaaggtgcagctggaggaggttcctccacta
aatggcaactgcgagaaagtagttcgtcctataattagattgcaggacaagaatattgtc
cttactcgaatcaacccagagattcgtgataccagtgttcttgtgaggttacgtcctgca
tgggaagaattaagaagctatttgattgctaggggtcgtaagcgatttgaagtttatgtg
tgtacgatggctgaaagagattatgcattagaaatgtggaggcttcttgatccagaagct
cacctcattgcaacaaaacagcttcttgatcgtgttgtttgtgttaaatcaggttctagg
aaatctttgctgaatgtcttccaatccggttcatgtcatccaaagatggccatggttatt
gatgaccgttcaaaggtttgggaagacaaagaccaaccgcgtgttcatgtagttccagca
tttacgccttactatgctcctcaagcagaggcagcaagtgtggtccctgttctttgtgtg
gcaaggaatgttgcatgcgatgtcaggggttgttacttcaaagaatttgatgagagtttg
ttgcgacggattctcgaaatttcttatgaagatgaagtggctgatctacctcctgctcct
gatgtgagcagctacttgatgtcagaggaagctggctttgtatccaatgagaatgtgaat
gctccaatttgtgaaggaataaatggtgtcgaagtggaaaggagactgaatcaaccggat
gataagcatgtaatagacatggccaataaccctactacaagccaaacggatgttcgagca
gatacttctcagttgccacctcctcttaatacgaatgtcattggaccaaaatcttcaaga
accttactgccttctcaaaagcctggtttgctcggggcccctatcagacgagatctctct
gctgatcatgacatgaagagaggactccttgcaatgaaacctggtatagatctcaggata
ccaaacttcggtgatcccccaattctctccagaatgcccgtacaattaccagcatgcgga
ttacaggttcaaggaagttcattagtggatgacgactccagtaaaggacctcaaaatagt
cgatcttcaggactcgttcaagaatctgatgcttcaaaagctgataaaccacggtctagc
aacaattcacaagttttagcaggagttgctatatctcaaaatcgagctactagcaataac
aaagaatatcaaactgaagcagggaaagttaccatacctccgcccccttctttatacatt
ggagttctacaagatattggtcgtagatgcagctcaaaggttgagttcaaaactgttgtc
agtaccagcaaggatttgcaattttcagttgaggttttgtttactggcgagaagattggt
gttggattgggtaagacaaggaaagatgctcaacaacaagctgctgagaatgcgcttcac
aatttggcagataagtatgctgcacatatgaagcctcttttgggacccgtggatacagat
ctcgataagctttctattggagccgaaaatggatttttatgggacactgttgctcctgca
gttaacgaattgccgaaggaagatgtttcgcataaagagaacaactccgaggcttctgat
gaacctgggagtgccaattctgattcggcaaatcagcagcagcagcagcatgttcagaag
cggctgagttccccaagatcatttccaagtaaacgatcgagggaagatgaagtacatggg
ccacaatatcttgcagcagcttcgtggcagcagcagaagaatggccattccattacttga
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integrated database retrieval system
