Cucurbita maxima (winter squash): 111478265
Help
Entry
111478265 CDS
T05246
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03030
DNA replication
cmax03410
Base excision repair
cmax03420
Nucleotide excision repair
cmax03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
111478265
03410 Base excision repair
111478265
03420 Nucleotide excision repair
111478265
03430 Mismatch repair
111478265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmax03032
]
111478265
03036 Chromosome and associated proteins [BR:
cmax03036
]
111478265
03400 DNA repair and recombination proteins [BR:
cmax03400
]
111478265
DNA replication proteins [BR:
cmax03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
111478265
DNA Replication Termination Factors
ELG1-RFC complex
111478265
Chromosome and associated proteins [BR:
cmax03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
111478265
DNA repair and recombination proteins [BR:
cmax03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
111478265
Check point factors
HRAD17(Rad24)-RFC complex
111478265
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
Rad17
Sigma54_activ_2
DNA_pol3_delta
DUF815
ABC_tran
AAA_22
RsgA_GTPase
AAA_5
AAA_29
RuvB_N
AAA_23
AAA_2
T2SSE
Mg_chelatase
nSTAND3
nSTAND1
FtsK_SpoIIIE
TsaE
SprT-like
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
111478265
NCBI-ProteinID:
XP_022978217
UniProt:
A0A6J1IKJ1
LinkDB
All DBs
Position
Unknown
AA seq
354 aa
AA seq
DB search
MLWVDKYRPKTLDQITVHEDVAQNLKKLVTEQDCPHLLFFGPSGSGKKTLVMALIRQMFG
ASAEKVKVENKTWKVDAGTRNVEIELTTISSTNHVELTPSDAGFQDRYIVQEIIKDMAKN
RPIDSKGKRGHKVLVLNDVDKLSREAQHSLRRTMEKYSSYCRLILCCNSSSRVTEAIRSR
CLNVRINGPTDDEIVKVLEFIGKKEGLQLPSGFASRIAEKSNRSLRRAILSFETCRVQQY
PFVSNQAIPPMDWEEYISEIASDIMKEQSPKRLYQVRGKLYELLVNCIPPEIILKRLLYE
LLKKLDAELKHEVCHWAAYYEHRMRLGQKSIFHIEAFVAKFMSIYKSFLISTFG
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgggtcgacaagtatcgtccaaaaaccctagatcagatcacagttcatgaagat
gtagcacagaatcttaagaaactggttaccgagcaggactgccctcatttgctcttcttt
ggcccctctggttccggaaagaaaaccctagtcatggcgcttatccggcagatgtttgga
gcaagtgcggagaaggtgaaggtggagaataaaacctggaaagttgatgctggaactaga
aatgttgaaatagagttaaccaccatatcaagtacaaaccacgtcgagctcactcccagc
gatgcaggtttccaagataggtatattgttcaagagataatcaaagatatggcgaaaaac
agacccattgactccaaagggaaaagaggacataaagttttggttctaaatgacgttgac
aaactatccagagaagcacagcactctcttaggagaacgatggagaaatatagctcgtat
tgtaggttaatactttgctgcaatagttcatcaagagtaactgaagcaatccgttctcgc
tgcctaaatgtgcggataaatggaccaacagatgatgagatcgtcaaggtactagagttc
attgggaagaaagaaggactgcaacttccatctggatttgcttcccgcattgcagaaaaa
tcaaaccggagtttgaggagagctatactatcattcgagacttgtcgtgttcaacagtat
ccttttgttagtaaccaggcaataccgccgatggattgggaggagtacatctctgagata
gcgtctgacataatgaaggagcagagccccaagagactgtaccaggttcgtgggaagtta
tatgaactactggttaattgtattccaccagagatcatattgaagaggctgctttatgag
ctgctcaagaaattggatgctgaattaaagcatgaggtctgtcattgggctgcatattat
gaacacaggatgcggcttggccagaaatccatcttccatattgaagcttttgtggcaaag
ttcatgagcatatacaagagtttcctcatttcaacgttcggctga
DBGET
integrated database retrieval system