Cucurbita maxima (winter squash): 111478411
Help
Entry
111478411 CDS
T05246
Name
(RefSeq) nucleolar protein 6 isoform X1
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
111478411
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cmax03009
]
111478411
Ribosome biogenesis [BR:
cmax03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
111478411
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nrap_D5
Nrap_D4
Nrap_D3
Nrap
Nrap_D2
Nrap_D6
Motif
Other DBs
NCBI-GeneID:
111478411
NCBI-ProteinID:
XP_022978417
UniProt:
A0A6J1IL20
LinkDB
All DBs
Position
Unknown
AA seq
1057 aa
AA seq
DB search
MDSNTLLDPMEMKVGELLKEFQLDYSPDLVKLVEDTVSTIKKAIKLIPDDLKVTAAAAPG
FIMDIGSDKVEFKFRKPKSIKIGGSYAFQGIAKPDVNVDLLVGLPKECFHEKDYLNYRYH
AKRFLYLCTIKKYLNSSSMFSKVEWSTLQNEARKPVLIVHPALEELKVAPGFFVRIIPTI
AASFFSISKLNLKRNNIHALNQGSLLAATPKYNTSILEDMYFEDTSEMVKKPFLESKSLL
ETLILLKVWARQRASIYVHDCLNGFLIAVILSYLITQNKINHSMTTIQMFRVAVKFIASS
NLWNHGLYFKLGPQSTISKEEKKQYKDLFPVVICNPSSNFNIAFRISQSGFAELQDEAAL
TLACLEKCSNGGFEEVFMTKIDFAVKYDHCIRLNLRGQVELYASGFCMDDECWRLYEQKV
HGILSQGLTDRAKFIRVSWRNTEPGCTIENGLSVFDTQPLLVGISISSVEKAFRVVDIGP
NADNKEDALKFRRFWGEKAELRRFKDGRIAESTVWETDQWTRHLILKRIVEYIFVRHLSP
MSKDRIMHAVDQIDFSLLHGSGDPITFSGSLLAAFEVLSKRLRSIEDIPLKVSTVQPLDS
AFRYTSVYPPEPHPLAEEKTSDLRIQQKLAPSCIQPLEVMIQLEGSGNWPTDEVAIEKTK
TAFLLKIGESLQSVWGMTCIASEDSVNVLVSGYAFHLKIWHEKGLSLVNKESGNELSNRI
SSTDKQLFIQSQHSNMISGLQARHSIYGPVVRLAKRWIASHFFSACLVEEAVELLVASIF
LKPLPFHAPLSRITGFLRFLRLLSEFDWTFSPLIIDINNDLGANEEKEIADKFNMTRKNL
QENPQSGSPAMFLATAYDKASEAWTRFSPKSSELKRLVAYARSSADLLTRLILQHQVDSF
LWECLFRTPLSNYDAVILLHRDKLPYPQRLLFPSELNRGVHVAKGNPSKIFSPFLLPRNL
KASSENIKDKLFVNFDPLRCYIADLQKEFSNTFNLWYDSLGGDAIGLTWGQHSSKKRGRD
EGVEEEKEPAEVLKSVGETGKGLMRSVYLLKAPRVTT
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atggattccaatacgcttttggacccaatggagatgaaggtcggggaactcttgaaggaa
tttcagcttgactactcccctgatcttgttaagctcgttgaggacacagtgtcaactata
aaaaaggcaattaaactcattccagatgacttgaaggttactgcggccgcagctccgggt
tttatcatggatattggctcagacaaagtggaattcaaatttaggaagccaaaatcaatt
aaaatcggtggtagttatgcctttcaaggcattgcaaaacctgatgtaaatgttgatctt
ttagttggcttgccaaaggagtgtttccacgagaaagactacctcaattaccggtaccat
gctaaaaggttcctttacctctgcacaatcaaaaagtatttgaactcatcttcaatgttt
tcaaaggttgaatggtccacacttcagaatgaggctcggaaacctgtcttaattgtccat
ccagctttggaagagctgaaggtagctcctggattctttgtcagaataattccaacaata
gcagcatccttttttagcatttcaaaattgaatctcaaacgaaacaacatccatgccttg
aaccaagggagcttacttgcagctacacctaagtataacactagcattttggaagatatg
tacttcgaggatacttcagaaatggttaagaagccttttcttgaatcaaaaagtttgtta
gaaactttaattctactaaaggtttgggctcggcagagagcttcaatatatgtgcatgat
tgcttgaacggatttttaatagctgtaatattatcatacctcattactcaaaataaaata
aatcattcaatgacgacaattcagatgttccgtgttgcagtgaaatttatagcctcttcg
aatttatggaatcacgggctctattttaagcttggacctcagagcactatttcaaaggag
gaaaagaagcaatataaagatttatttcctgtggtcatctgcaatccgtcttccaacttt
aacattgcatttcgaatatcacagtcaggtttcgctgagcttcaagatgaggctgctttg
acacttgcatgcttggagaaatgcagcaacggtggatttgaagaggtttttatgaccaaa
attgactttgctgttaaatatgaccattgcattagattgaatttgaggggacaagtcgag
ttatatgcatcaggcttttgtatggatgatgagtgttggagactatatgagcagaaagta
catgggatcttaagtcaaggcctgactgatagagcaaaattcattcgtgtttcctggagg
aacacggaaccaggatgcactattgaaaatggattatcagtatttgatacgcagccattg
cttgttggaatttcaattagctctgtggaaaaagcttttcgtgtggttgatattggtcct
aatgctgataacaaagaagatgccctaaagtttcggagattttggggtgaaaaggctgag
ctcaggagatttaaagatggcagaattgcagaaagcacagtttgggaaactgatcaatgg
acgagacacctcattttaaagagaattgtggaatatatttttgttcggcacctttcaccg
atgtcaaaagaccgcattatgcatgctgtggatcagattgatttctccctgctccatggt
tctggagatccaataacattttctggaagtttgcttgcggcttttgaagttttatcaaag
cgattacgttccattgaagacattcctttaaaggtgtctaccgtacagcctttagactca
gctttcaggtatacatctgtttatcctcctgaacctcacccactggcagaagaaaagaca
agtgatctgcgaattcagcaaaagcttgctccatcctgcattcagccactggaagttatg
attcagctggaaggctctgggaactggccaactgatgaggtagcaattgaaaaaaccaaa
acagccttccttcttaaaattggagagagtctgcagagtgtttgggggatgacatgtatt
gcttctgaagattctgttaatgtacttgtctctggttatgccttccacctaaaaatttgg
catgaaaaaggcctgagtttggtgaataaggaatctggaaatgaattatcaaatcggatc
tcctcaacagataagcaactttttattcaaagtcagcactccaacatgattagtggatta
caggctcgtcactcaatatatggaccagttgttaggttggcaaaaagatggatagcctca
catttcttttcagcatgcttggtagaggaagcagttgaactgttggtagcatccattttc
ctgaagcctctaccctttcatgccccactttctcgaatcacaggttttttaaggttccta
agattactgtcggaatttgattggactttttctccattgattattgacataaacaatgat
ttgggtgcaaacgaggagaaagaaatagctgacaaatttaacatgacacgaaaaaattta
caagaaaatccgcaaagtggaagtcctgccatgttcttagcaacagcttatgacaaggca
tccgaggcttggaccaggttctcaccaaaatcatcggagttaaaacggttggttgcttat
gctagaagcagcgcagatttgttgactagactaatattacagcatcaggtcgactctttt
ctgtgggagtgccttttccgaacaccattgagcaactacgatgctgttattcttctccat
agagataaattaccatacccacaacgccttctcttcccatctgaactgaaccgaggagtt
catgtcgcaaaagggaatcctagcaagatcttctctccattcttgttgcctagaaacttg
aaagcaagttctgagaacatcaaggacaagctttttgtaaattttgatccattaaggtgt
tatattgcggatctgcagaaagaattctccaacactttcaacttatggtatgactctttg
ggaggcgatgcaattggactaacttgggggcaacacagttcaaagaagcgtggacgtgat
gaaggtgttgaggaggaaaaagaaccagctgaagtgctaaaatctgttggtgaaactggt
aaaggtctaatgaggagtgtctacctactcaaggccccaagagtcacgacttaa
DBGET
integrated database retrieval system