Cucurbita maxima (winter squash): 111478703
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Entry
111478703 CDS
T05246
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 1 isoform X1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
cmax
Cucurbita maxima (winter squash)
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cmax01009
]
111478703
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmax03021
]
111478703
Enzymes [BR:
cmax01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
111478703
Protein phosphatases and associated proteins [BR:
cmax01009
]
HAD phosphatases
Fcp/Scp phosphatases
111478703
Transcription machinery [BR:
cmax03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
111478703
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NIF
dsrm
Motif
Other DBs
NCBI-GeneID:
111478703
NCBI-ProteinID:
XP_022978882
UniProt:
A0A6J1IMA7
LinkDB
All DBs
Position
Unknown
AA seq
794 aa
AA seq
DB search
MYKSVVYQGDVLLGEVEIYPEEKNGYKNIEVKEIRISHLSQPSERCPPLAVLHTIAASGI
CFKMESKTSQSQDMPLHLLHSSCIMENKTAIMVFGMEELHLVAMYSRDHDKQYPCFWGFN
VAMGLYNSCLVMLNLRCLGIVFDLDETLVVANTMRSFEDKIEALQRKISSEVDPQRTAGM
LAEVERYQDDKLILKQYAENDQVIENGKVIKSQSEVVPALSDNHQPFVRPLIRLHEKNII
LTRINPQIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPDS
NLINPKELLDRIVCVKSGSRKSLFNVFQDGFCHPKMALVIDDRLKVWDEKDQPRVHVVPA
FAPYYAPNAEGNNAVPVLCVARNVACYVRGGFFREFDEVLLQKIYNISYEDDANDIPSPP
DVSNYLGSEDEYSVSNGNKDTLTFDGMSDMEGDRRMKDAFLASSTVNSADPRVPSLQYTM
ASASGTVPVPPYFPNMPLPHVDSVAHVAASEPSLQSSPAREEGEVPESELDPDTRRRLLI
LQHGQDTRERQSSEPAFLGRPPPLPQVVGPRAQPRGSWSPMEEEMSPLQLSWTRKEFPVD
EEPIREKHRSNHPSFFPKIDSSFPPVKTPHENQRLSKEAFYRDDRVRVSRRPSSYPAFSA
DEIPMNQSSSRSRENDIESGRSIWSETPVGALQEIAMKFGTKVEFKPALVSSTDLQFAVE
AWFVGEKIGEGIGKTRREAQRHAAEGSIKNLANVYVSHCKADSTSTNDMNKFPNDNGSGK
RMRTDFHGNLPKPK
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgtataaatcggtggtttaccaaggggatgtgctactgggagaggtagagatttaccca
gaagaaaagaatggctacaagaacatcgaagtgaaggaaatcagaataagtcacctctcg
caaccgagtgagaggtgcccaccacttgcagtgcttcataccattgcagcctctggaatt
tgcttcaaaatggagtcaaagacctcgcagtcacaggacatgccgctccatcttttgcac
tcctcgtgtatcatggagaataagactgctataatggtgtttggaatggaggagctacat
ttggtagccatgtattctagagatcatgacaagcagtatccatgtttctggggcttcaat
gttgcaatgggactctacaattcatgtcttgtcatgctgaatcttagatgtcttggcatt
gtatttgatcttgatgagacacttgtggttgcaaatacaatgcgctcgtttgaggataaa
attgaagccctgcagcgaaaaataagcagtgaggtagatccacagcgtactgcgggcatg
ctggcagaggttgagcgatatcaagatgacaagttaattctaaagcaatatgctgaaaat
gaccaggttatagaaaatggaaaagtgattaaaagtcaatcggaggttgttcctgcattg
tctgacaatcaccaaccttttgttcgaccactcatacgattgcatgaaaaaaatatcatt
ctgactcgcatcaacccccagattcgtgatacaagtgttcttgtgaggttgagacctgca
tgggaagatcttcggagctacttgactgcaagaggtcgcaagcgttttgaggtctatgtg
tgtacaatggctgaaagggattatgctttggagatgtggaggcttcttgatccagattca
aatttgataaatcccaaggaattgctggatcgcattgtttgtgtcaagtctggttctagg
aagtcattgttcaatgtcttccaagatggcttttgccaccccaagatggctctagtaatt
gatgatcgtttgaaagtgtgggatgaaaaggatcaacctcgagttcacgttgttcctgca
tttgctccttactatgcccctaacgccgaaggaaataatgccgtccctgttctatgtgta
gcaaggaacgttgcctgctatgttagaggtggttttttcagggaatttgatgaggtcctt
ctgcaaaaaatttataatatttcttatgaagatgatgccaatgatattccctctccacct
gatgttagcaactatctcggctcagaggacgaatattcggtctctaatggaaacaaagat
acactaacttttgatggtatgtcagacatggaaggcgatagacgaatgaaggatgcattt
ttggcttcttcaactgtcaacagtgcagatccacgagtgccttctcttcaatatacaatg
gcttctgcttctggcactgttccagttccgccatattttcctaacatgccacttccccat
gttgattcagtggctcatgtggccgcctctgaaccaagtttacaaagctctcctgctaga
gaggagggtgaggtaccagaatcagaattggatcctgatacaaggcgtagacttcttata
ttgcaacatggacaagatacaagagagcgtcaatcaagtgaacctgcattcttagggagg
cctcctccattaccgcaggttgttggtccacgtgcacaaccacgtggaagttggtctcca
atggaagaagaaatgagcccattacaactaagttggacacgcaaagagttccctgtagat
gaagaaccgatcagagagaagcataggtctaatcatccttcattttttcccaagattgac
agttcctttccacctgttaaaactcctcatgaaaatcagagattgtcaaaagaggctttt
tatagagatgatcgtgtgagagtaagtcgaaggccatctagttatcctgccttttcagct
gatgagattccaatgaatcaatcatcttcaagaagtcgagagaatgacattgaatctgga
cgctccatctggagtgaaacccctgttggagctctacaggaaattgcaatgaagtttggc
accaaggtggaatttaagccagcattagtctccagcacagatctacagtttgctgttgag
gcatggtttgtgggagagaaaattggtgaaggaattggtaaaacaagaagggaagcgcag
cgacatgctgctgaaggttctataaagaacttggctaatgtttacgtatcgcattgtaag
gctgactcgacgtctacaaacgatatgaacaaatttcctaacgacaatggatctggaaaa
cgaatgaggacggacttccacgggaatcttccaaaacctaaatga
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