Cucurbita maxima (winter squash): 111478774
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Entry
111478774 CDS
T05246
Name
(RefSeq) WD repeat-containing protein 3-like
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
111478774
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cmax03009
]
111478774
Ribosome biogenesis [BR:
cmax03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
111478774
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_2nd
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40_Prp19
Beta-prop_THOC3
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_WDR36-Utp21_2nd
WDR55
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Utp12
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
Beta-prop_WDR75_1st
NBCH_WD40
ANAPC4_WD40
DSE1_N
Beta-prop_TEP1_C
WDR90_beta-prop_4th
ASA1
CFAP251_N
Beta-prop_Aladin
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_NOL10_N
Beta-prop_SPT8
PEP5_VPS11_N
Beta-prop_RIG_2nd
Beta-prop_WDR41
Beta-prop_VPS8
Beta-prop_WDR19_1st
Beta-prop_WDR75_2nd
Beta-prop_DCAF4
Beta-prop_HPS5
PAC11
Beta-prop_NWD2_C
Beta-prop_IP5PC_F
CDtoxinA
Beta-prop_ACSF4
WD_LRWD1
WDR54
RMC1_N
PROPPIN
KNTC1_N
Beta-prop_WDR35_TULP_N
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-GeneID:
111478774
NCBI-ProteinID:
XP_022978990
UniProt:
A0A6J1IRW5
LinkDB
All DBs
Position
Unknown
AA seq
941 aa
AA seq
DB search
MVKAYLRYEPAAAFGVIVSIDSNITYDSSGKHLIAPALEKIGVWNVRQGVCTKNLIPTQG
SRGPSLAVTAVASAPSFLIASGYADGSIRIWNADKGTCETTLHGHKGAVTVLRYNKLGSM
LASGSKDNDIILWDAVGETGLFRLRGHRDQVTDLIFLDSSKKLVSSSKDKFLRVWNLETQ
HCMQIVGGHHSEIWSMDIDPDERFLVTGSADQELRFFTTKHDLVAGKSVDESNANGSEKD
RDKSTQSKWEVLKLFGEIMRQSKDRVATVRFNKSGNLLACQVAGKTVELFNVLDETEAKH
KAKRRIKRKKEKKAGKGEPDVIENGETNHATGEEGSGSIITVPDVFKLLHTIRASKKICS
ISFCPIPKKSLSTLALSLNNNLLEFYSVESSAVTKLHSIELLGHRSDVRSVTLSSDNSLL
MSTSHNAVKIWNPSTGSCLRTIDSGYGLCGLIIPQNKYAIVGNKSGAIEILDIASGSCIE
VVEAHGGAIRSIVGLPNENGFVTASADHDIKFWEYHIEKKSDQEPKTLSITFVRSMKMND
DVLVAAVSPDAKYIAAALLDSTVKVFFMDTFKVFRTLFGHKLPVLCMDVSSDGDLLVTGS
ADKNLKIWGLDFGDCHKSIFAHSDSVMAVQFVKKTHYVFSVGKDRLVKYWDADKFELLLT
LEGHHADVWCLAISNRGDFIVTGSHDRSIRRWDRTEEPFFIEEEKEKRLEEMFESDLDNA
FENRFVPSEEVPEEGAVALAGKKTQETISATDLIIDSLDMAEAESKRMAENEEEKRNGKA
VHFEPNAMMLGLSPSDYVLRALSNVHTNDLEQTLLALPFSDSLKLLSYLKDWTSKPDKVE
LICRISTVLLQTHHNQLVTTPAARPALTILRDILYARIKECKDTIGFNLAAMDHLKQLMA
MRSDALFQDAKLKLQEIRSQNSKRLEMRTDIRRGKRNKKNK
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggcttacctccgatacgagcctgcggcggctttcggagtgatcgtctccatt
gattccaatattacatacgatagttccggaaagcatctcatagctccagctcttgaaaag
attggagtctggaatgttcgtcaaggtgtctgcaccaagaatttaatacctactcagggc
tctcgtggtccttctcttgctgttacggccgtcgcctcggctccatcttttctgatcgcg
agtgggtatgctgatggtagtataagaatttggaatgctgataaaggaacctgtgagact
actttacatggacataaaggggccgttaccgtccttaggtacaacaagcttggttctatg
cttgcatctggaagcaaagataacgatattatactgtgggatgctgttggcgagacaggc
ctctttcgcctccgtggccatcgtgatcaggtaactgatctaatatttctagattcaagt
aaaaaactcgtcagttcttccaaagacaagtttttaagggtgtggaatcttgaaacacag
cactgtatgcaaatagttggtgggcatcatagtgaaatttggtcaatggacattgatcca
gatgagcggtttttagttactggatctgctgatcaggaacttcgttttttcacaactaaa
catgatttggtggctggtaagtctgtcgatgaatctaatgcaaatggttccgagaaggat
agagataaatccactcaaagcaaatgggaagttctaaaactgtttggtgaaattatgcga
caaagtaaggatagagttgctactgtgagatttaacaagtctggaaatttgttggcctgt
caagtggcaggaaagactgttgagttattcaatgttttggacgaaactgaagccaagcat
aaagcaaaacgtcgtattaagcggaagaaagaaaagaaagctggaaagggagaaccggat
gtaattgaaaatggcgagacaaatcatgctactggagaagaaggaagtggctccattatt
acagttcctgacgtatttaagctactccacacaattcgggctagcaagaaaatttgttcc
atttctttctgtccaattccaaaaaaatcgctgtccacattagcattatctttgaacaat
aatttattagagttttattcagttgaaagcagcgcagttacgaaattacattctattgaa
ctcctggggcaccgttcggatgtcagaagtgtaacacttagttccgataattctcttttg
atgtccactagtcacaatgctgtaaaaatttggaatccaagtactggttcttgtcttcgt
actattgattctggatacgggctttgtggtttaataattcctcaaaacaagtatgcaatt
gttggaaacaaaagtggggctatagaaattttggacattgcaagtggcagttgcatcgaa
gttgtagaagctcatggtggcgcaatacggtcaattgtgggtttaccaaatgaaaatgga
tttgtcactgctagcgctgaccatgacattaagttttgggagtatcatattgaaaaaaaa
tcggatcaagagcctaaaaccctttctataacgtttgtgaggagtatgaagatgaatgat
gatgttcttgttgctgctgttagtcctgatgccaaatatattgctgcagcactgttggat
tccacagtgaaggtcttctttatggataccttcaaagttttccgtactttatttggtcac
aagctacctgttctgtgcatggatgtctcgtcagatggagatttgttagtgactggctct
gcagacaaaaatttgaagatttggggtttggactttggtgattgtcacaagtctattttt
gctcattctgatagtgtcatggctgttcagtttgtgaagaaaactcactatgtgttcagt
gttggaaaggaccgtcttgtaaagtattgggatgctgacaaatttgagttacttttaacg
cttgaggggcatcatgctgatgtttggtgtcttgctatcagcaaccgtggtgatttcata
gtcacaggatctcatgatcgatccatacgtcgttgggatcgaactgaagaaccatttttc
atagaggaagagaaagaaaagcggctggaagaaatgtttgagtctgaccttgacaatgca
tttgagaacaggtttgttcccagtgaagaagttccagaggagggtgcagttgctttggct
gggaaaaagactcaagaaactatttcggctacagacttaattatagattctctggacatg
gcagaggcagaaagcaagcgtatggctgaaaatgaggaggagaagagaaatgggaaagct
gttcattttgagccaaatgctatgatgcttggcctctcaccatctgattacgttctccga
gccctttcaaatgttcacacaaatgatttagagcagacattattggctttaccattctct
gattctctgaagcttctatcttacttgaaagattggacttccaaacccgacaaggttgag
ctcatttgcaggatatctacagttttgttgcagacacaccacaatcagcttgttactacc
cctgctgcaagacctgcgttgactattttaagagacattctttacgctagaatcaaggaa
tgcaaagacaccattggtttcaacttagcagcgatggatcatctcaagcaactaatggcc
atgagatctgacgcactatttcaagacgctaaattgaagctgcaagaaattcgttcccaa
aattcaaagcgtttggagatgaggacagatataagacgaggaaagagaaataaaaagaac
aagtaa
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integrated database retrieval system
