KEGG   Cucurbita maxima (winter squash): 111478859
Entry
111478859         CDS       T05246                                 
Name
(RefSeq) cyclin-H1-1-like
  KO
K06634  cyclin H
Organism
cmax  Cucurbita maxima (winter squash)
Pathway
cmax03022  Basal transcription factors
cmax03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cmax00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    111478859
  09124 Replication and repair
   03420 Nucleotide excision repair
    111478859
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cmax03021]
    111478859
   03400 DNA repair and recombination proteins [BR:cmax03400]
    111478859
Transcription machinery [BR:cmax03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     111478859
DNA repair and recombination proteins [BR:cmax03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     111478859
SSDB
Motif
Pfam: Cyclin_N Cyclin_C_2 TFIIB
Other DBs
NCBI-GeneID: 111478859
NCBI-ProteinID: XP_022979128
UniProt: A0A6J1IV79
LinkDB
Position
Unknown
AA seq 287 aa
IQKITLTVPLLLFLQERKTSNLVLNGKHSHAKALSIEEEQFMRVFYDNKLQEVCNNFHFP
HKIQATALIYFKIFYLQWSVMQHNPKYVMLTCIYAACKIEENHVSAEELGKGISQDHQII
LNYEMIVYYCLEFGLIVYAPYRSVKGYVNDMEKLFHENTEMLQMLKETAMSEVDNIMLTD
APLLFPPGQVNRHAFPSEKDLKHINRKLKSCWGLGSNDKSEKGRRNQSTNQRRVRMKRKI
YLRTISCVCPKGDRHIIWICCLCHSMFTNLDPRCIIRNIAAGQVLLS
NT seq 864 nt   +upstreamnt  +downstreamnt
attcaaaagataacactaacagttcctctgctgctctttttgcaagaacgtaaaacttca
aatttagtattaaacggcaaacattctcatgccaaagctttgagtattgaagaagagcaa
tttatgcgagtattttacgataacaaacttcaagaagtatgcaacaattttcattttcct
cataaaatccaggcaacagctcttatatattttaaaatattctatctacaatggtctgtg
atgcaacataatcccaaatatgtgatgttaacctgcatttatgcagcttgtaagatcgaa
gaaaatcacgtctcagctgaggagcttggtaagggaatttcacaggatcatcaaattatt
ctcaattatgagatgatagtatactactgtctggaatttggtcttattgtttatgcacct
taccgatcagttaaaggctacgtaaacgacatggagaaactattccatgagaacactgaa
atgcttcaaatgctgaaggaaacagcaatgtcagaggttgataatattatgttaacagat
gccccactcctcttcccccctgggcaggtcaacagacatgccttcccatcagaaaaggat
ttaaagcacatcaacagaaaattaaaatcttgctggggactgggctccaatgacaagagt
gaaaaagggagaagaaatcaaagcacaaatcaaagaagagttcgaatgaaacgcaaaata
taccttcgcacaattagctgtgtgtgtcctaaaggggatcggcatattatttggatttgt
tgcctatgccacagcatgtttacaaatctggatcctcggtgtataattaggaacattgct
gctgggcaggtactcttatcttag

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