Cucurbita maxima (winter squash): 111479327 Help Entry 111479327         CDS       T05246                                  Name (RefSeq) phytochrome B-like   KO K12121   phytochrome B Organism cmax  Cucurbita maxima (winter squash) Pathway cmax04712   Circadian rhythm - plant Brite KEGG Orthology (KO) [BR:cmax00001]  09150 Organismal Systems   09159 Environmental adaptation    04712 Circadian rhythm - plant     111479327 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  PHY PAS PAS_2 GAF HATPase_c HisKA PAS_4 PAS_9 PAS_3 PAS_8 DUF1425 Diguanyl_cycl_sensor Motif Other DBs NCBI-GeneID:  111479327 NCBI-ProteinID:  XP_022979677 UniProt:  A0A6J1IPD3 LinkDB All DBs Position Unknown AA seq 1131 aa AA seqDB search MVSSNRATHWHQQQAQSSNTNTSNFRSHRTDSVNKAIAQYTADARLHAVFEQSGESGKSF DYSQSIRTSTQSVPEQQITAYLSKIQRGGHIQPFGCMIAIDEASFRVIAYSENARELLGL TPQSVPSLEKPEILTIGTDVRNLFTSNSAILLEKAFGAREITLLNPVWIHSKNSGKPFYA ILHRIDVGIVIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQSLPGGDIKLLCDTVVES VRELTGYDRVMVYKFHEDEHGEVVAESKRPDLEPYIGLHYPSTDIPQASRFLFKQNRVRM IVDCNASSVRVIQEAGLMQHLCLVGSTLRAPHGCHAQYMANMGSIASLAMAVIINGNDDE AIGGQNSTRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQLASQMSEKHVLR TQTLLCDMLLRDSPTGIVTQSPSIMDLVKCDGAALYYQGKYYPLGVTPTEAEIKDIVEWL LAFHGDSTGLSTDSLADAGYPGAALLGDAVCGMAVAYITKRDLLFWFRSHTAKEIKWGGA KHHPEDKDDGQRMHPRSSFKAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFKEDVAMTS KAVVHPQLGDLDLQGIDELSSVAREMVRLIETATAPIFAVDADGHINGWNAKIVELTGLA AEEAMGKSLVRDLVYKESEETVDKLVSRALKGEEDKNVEIKMRTFGPEDQRTPIFVVVNA CSSRDYTDNIVGVCFVGQDVTCQKVFMDKFISIQGDYKAIVHSPNPLIPPIFASDDNTCC SEWNTAMEKLTGWSKEDIIGKMLVGEVFGSCCRLKGPDALTKFMIVLHSAIGGQDNEKYP FSFYDKKGKYVQALLTANKRMNMEGQIVGAFCFLQIASPELQQTLRMQRQQEKNRFARMK ELAYICQEVKSPLSGIRFTNSLLEATDLSEDQKQFLETSVACEKQMLKIIEDMDLECIDD GTMELEKGEFLLGSVINAVVSQVMILLRERNLQLIRDIPEEVKTMAVYGDQMRIQQVLAD FLLNMVRYAPSPEGWVEIRVCPFLKQNPDGHTLAHTEFRIVCPGEGLPPELVQDMFHSSR WVTQEGLGLSMCRKILKLMNGEVQYIRESERCYFLITLELPLTERGLNDVG NT seq 3396 nt NT seq  +upstreamnt  +downstreamnt atggtttccagtaatcgagcgacgcattggcatcaacaacaagcacagtcctcgaacacg aatactagcaatttccgatctcaccgtacagattctgtcaacaaagccatagcgcagtac acagccgatgctcgtcttcacgcggtgttcgagcagtcaggtgagtctgggaaatctttt gactactcacaatctataagaacttcgacgcaatctgtgccggagcagcaaattactgct tatttgtcgaagattcaaagaggcggccatatccagccctttggatgtatgatagccata gatgaggctagttttcgggttattgcatacagtgagaacgctagggaattgctcggttta actccccaatcagtgccgagtcttgaaaagcctgagatcctcacaattgggactgatgta cggaatttgttcacttccaacagtgcaattctgctcgagaaggcatttggggctcgagaa atcactttgttgaaccctgtttggattcattccaagaattctggtaagcctttttacgca attttgcataggattgatgtgggaattgtgattgatttggagcctgcaagaacggaggat cctgccctttctattgctggcgcagtccaatcgcaaaaacttgcggtacgtgctatttct cagttacaatcactccctggtggagatattaaactgttgtgtgatactgtggttgagagt gttagggagcttactggatatgatagggttatggtgtataaatttcacgaggatgaacat ggtgaggttgtggctgaaagcaagaggcctgacttagagccatacattggattgcattat ccttctactgatattcctcaggcatcaaggtttttgtttaagcaaaaccgtgttaggatg atcgttgattgcaatgcctcttcagttcgtgtaattcaggaggcagggcttatgcaacat ctatgcttggtgggttcaactcttcgggctccccatggctgccatgctcagtatatggcc aatatgggctccattgcttcattagcaatggcagttattatcaatggtaatgatgatgaa gctattggcgggcaaaactcaacaaggctttggggtttggttgtctgccaccatacttct gctcggtgtattccattcccacttcggtatgcctgtgagtttctaatgcaagcctttggg cttcaactgaatatggaattgcagttggcttcacagatgtctgagaaacatgttttgagg actcaaactctcttgtgtgacatgcttcttcgtgattccccaactgggattgttacacag agtccaagcatcatggaccttgtaaagtgtgatggggcagctctctactatcaagggaaa tattaccctctgggtgttacgccaaccgaggccgaaataaaggatattgtggaatggttg ttggctttccatggagattcaactggtttaagtacagatagcttggctgatgctggatat ccaggggcagccttgctgggtgatgcagtttgtggaatggctgttgcttacatcacaaaa agggatttgctattttggttccgatcacatacagcaaaagagatcaaatggggtggcgca aagcatcacccagaggataaggacgatggtcaaagaatgcatccacgttcttcattcaag gcattcttggaagttgtaaaatcccgtagtttaccatgggagaatgcagaaatggatgca attcactcattgcagcttattctgcgagactcatttaaggaagatgtggcaatgacttca aaggcagttgtgcaccctcaactaggggatcttgacttgcaagggatcgacgagctcagc tcagttgcaagagaaatggtcaggttaattgagactgcaactgcccctatctttgctgta gatgccgatggtcatatcaatggatggaacgctaagatagttgagttgactgggcttgca gctgaggaagctatggggaaatccttagttcgtgatcttgtgtataaagaatctgaagaa acagttgacaaacttgtttcccgggctttaaaaggtgaagaagacaaaaatgtagagata aaaatgaggacatttgggccggaagatcaaagaacgccaatttttgtggttgtaaatgct tgctctagcagggactacaccgataatatagttggcgtttgttttgttggtcaagatgtt acctgccaaaaagtgttcatggacaaatttattagcatacaaggtgattataaagcaatc gttcatagtccaaatcctcttatccctccaatatttgcttcagacgacaatacatgttgc tcagaatggaataccgccatggaaaagctcactggatggtccaaagaggacataattgga aaaatgctagtaggagaagtttttggaagttgttgtcgactgaagggtccagatgcattg accaaatttatgattgtcttgcacagtgcaattggtgggcaggacaatgaaaaatacccc ttttctttttacgacaaaaaggggaaatatgtgcaagctctcttaacagcaaataagagg atgaatatggagggtcagattgttggagctttctgcttcttacagatagctagtcctgaa ttgcagcaaactcttagaatgcagaggcaacaggagaagaaccggttcgctaggatgaaa gagctggcttacatttgccaggaagtgaagagtcctttgagtggcatacgcttcactaac tcacttttggaggctacagatttgagtgaagatcaaaaacagttcctcgagaccagtgtt gcttgtgaaaagcagatgttgaagattatagaagatatggatttggaatgtattgatgat ggtacgatggagcttgagaagggggagttcttattgggaagtgttatcaatgctgttgtt agccaagtgatgatactcctcagagaaaggaacttacagctaatccgtgatataccagaa gaagtaaagactatggctgtctatggcgatcaaatgaggattcaacaggtcttagctgat ttcttgttgaatatggtccgttacgcaccctctccagaaggttgggtagaaatacgtgtc tgtccatttttgaagcaaaatccagatggacatactcttgcacacactgaattcaggatt gtatgccctggggaaggtctaccacctgagttggttcaggacatgtttcatagtagcaga tgggtgactcaagaaggcttaggcttaagcatgtgcagaaagatattgaagctcatgaat ggtgaagtccagtacatcagagagtctgaaaggtgttatttcttgatcactcttgaactc cccttgacagagagaggcctaaacgacgtcggttag

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