Cucurbita maxima (winter squash): 111479717
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Entry
111479717 CDS
T05246
Name
(RefSeq) WD-40 repeat-containing protein MSI1-like
KO
K10752
histone-binding protein RBBP4
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03082
ATP-dependent chromatin remodeling
cmax03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111479717
03083 Polycomb repressive complex
111479717
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmax03036
]
111479717
Chromosome and associated proteins [BR:
cmax03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
111479717
Histone modification proteins
HAT complexes
HATB complex
111479717
HDAC complexes
Sin3A-HDAC complex
111479717
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
111479717
PRC2.2
111479717
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
111479717
Heterochromatin formation proteins
Other heterochromatin formation proteins
111479717
Chromatin remodeling factors
NuRD complex
111479717
NuRF complex
111479717
NuRF complex (fruit fly)
111479717
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
WD_LRWD1
ANAPC4_WD40
MIOS_WD40
Beta-prop_DCAF4
Beta-prop_RIG_1st
eIF2A
WD40_MABP1-WDR62_1st
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
111479717
NCBI-ProteinID:
XP_022980301
UniProt:
A0A6J1IT85
LinkDB
All DBs
Position
Unknown
AA seq
423 aa
AA seq
DB search
MEKGDKEIRGKTNERLVNEEYKIWKKNTPFLYDLIITHALEWPSLTVEWLPDRDEPPGKD
YSVQKMILGTHSFDNKPNYLMLAQVQLPLESSENDARHYRDDRASGGGFGCANGKVQIIQ
HINHDGEVNRARYMPQNPFIIATKTVSAEVFVFDYSKHPSIPPLDGKCNPDLRLRGHKSE
GYGLSWSKFKQGHLLSGSEDSHICLWDINATPDNKTLEAMQIFKGHEGVVGDIAWHMRHE
YLFGSVGEDRYLHVWDLRSPSANKPVQSVVAHQSEVICLTFNPFNEWLVATGSTDKMVKL
FDLRNISSSLHTFDCHKEEVFQVGWHPKNEMILASCCRGRRLMVWDLSRIEEEQTPEDVE
DGPPELLFIHGGHTNIISDFSWNPCEEWVVASVAEDNILQVWQMAENVYYGEDDLLEEPP
KLS
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggagaagggcgataaagagatacgtggaaaaacgaacgagagactggtaaatgaggag
tacaagatttggaagaagaatactccatttctttacgatttgatcatcactcatgcccta
gagtggccttcactcaccgtcgagtggttgccggaccgggatgagcctccgggcaaggat
tactccgttcagaagatgattttggggactcatagcttcgataataagccgaattacctc
atgcttgctcaggttcagcttccgcttgagagttcggaaaacgatgcgcgacattaccgt
gacgatcgtgccagtgggggtggctttgggtgtgcgaacggcaaggtacaaataatccag
catataaatcacgacggcgaagtcaatagagcccgttatatgcctcaaaatccatttatt
attgccacaaagactgtcagcgctgaagtctttgtttttgactacagtaaacacccatcc
ataccacctctagatggtaaatgtaatcctgacttgaggttgaggggtcacaagtccgaa
ggctatggtttatcatggagcaagttcaagcagggccatttacttagtggctctgaggat
tcacatatttgtttatgggacattaatgctactccggataacaaaaccctcgaggctatg
caaatttttaagggtcatgaaggtgttgtgggagacattgcctggcatatgaggcatgaa
tacttatttggttcagttggtgaagatcgatacctacatgtatgggatctgcgaagtcct
tcagctaataagcctgtacagtctgtagttgctcatcaaagtgaggtaatttgcttgaca
ttcaatcccttcaatgagtggttagtagccacagggtcaactgataagatggttaagttg
tttgatctacgtaatatcagctcatccctccatacctttgactgtcacaaggaggaggtt
tttcaggtgggctggcatccaaagaacgaaatgatcttagcttcttgttgtcgtggaagg
agactcatggtttgggaccttagcaggatcgaggaggagcagacaccggaggacgtagaa
gatgggccacccgaattgctgttcattcacggtggtcataccaatataatatcagacttc
tcttggaatccctgtgaggagtgggtcgttgctagtgtagctgaagataacatactacaa
gtctggcagatggctgagaacgtctactatggtgaagatgatttgcttgaggaacctcca
aagctctcttag
DBGET
integrated database retrieval system
