Cucurbita maxima (winter squash): 111479843
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Entry
111479843 CDS
T05246
Name
(RefSeq) protein RAE1-like
KO
K14298
mRNA export factor
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111479843
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmax03019
]
111479843
03036 Chromosome and associated proteins [BR:
cmax03036
]
111479843
Messenger RNA biogenesis [BR:
cmax03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
111479843
Chromosome and associated proteins [BR:
cmax03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
111479843
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_SPT8
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_DCAF12
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_IFT122_1st
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
111479843
NCBI-ProteinID:
XP_022980460
UniProt:
A0A6J1ITM9
LinkDB
All DBs
Position
Unknown
AA seq
344 aa
AA seq
DB search
MSAFANPNPNKSLEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVASTP
KASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQAMTVAMHEAPVKEVAWIPE
MSLLVSGSWDKTLKYWDTRQPNPVHTQQLPDRCYSMTVRYPLMVVGTADRNLIVFNLQNP
QNEFKRIVSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDESLANKNFTFKCHRDGSE
IYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMLRCSQPISSSTFNQDGSIFAY
SVCYDWSKGAENHNPATAKTCIYLHLPQESEVKGKPRVGGSGRK
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcatttgcgaatccaaaccctaataaatccctcgaggttgctcagcctccgagt
gattctgtgtcgagccttagttttagtccaaaggccaatcacttggttgccacttcatgg
gataatcaggttcgttgttgggaaataatgcaaaatgcgggtaatgttgccagtacgcct
aaggcttctatatctcacgatcaaccggttttatgctcagcgtggaaggacgatggaaca
actgtgttttctggaggctgcgacaaacaagttaaaatgtggcccttgttgtccggtggc
caagccatgactgtagccatgcatgaagcacctgtcaaagaagttgcgtggatccctgag
atgagcctattagtctctggaagctgggacaagacattgaagtattgggatacaaggcag
ccaaacccagtgcatactcaacaacttcctgatcgctgttattcaatgacagtgagatat
ccacttatggtagttggtactgcagacagaaatctgatagtgtttaacttgcaaaatcct
cagaatgaatttaagagaattgtttcacccttgaagtatcaaacaagatgtgtagctgcc
tttcctgatcagcaaggttttttggttggttcaattgagggaagggttggtgttcaccac
cttgatgagtctttggcgaataagaacttcacttttaagtgccacagggatggatctgag
atatattctgtcaactccttgaactttcatcccgtgcatcacacttttgcaactgcaggt
tcagatggtgcctttaatttctgggacaaggatagcaaacagaggctgaaggctatgtta
cggtgcagtcagcccataagtagtagcactttcaaccaggatgggtcgatatttgcatat
tcagtgtgctatgattggagtaaaggggcagaaaatcacaacccagcaacagcaaagact
tgcatttacttgcaccttccacaggagtctgaggttaaaggcaagcctcgggttgggggc
agcggaagaaagtag
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integrated database retrieval system