KEGG   Cucurbita maxima (winter squash): 111479843
Entry
111479843         CDS       T05246                                 
Name
(RefSeq) protein RAE1-like
  KO
K14298  mRNA export factor
Organism
cmax  Cucurbita maxima (winter squash)
Pathway
cmax03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:cmax00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    111479843
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cmax03019]
    111479843
   03036 Chromosome and associated proteins [BR:cmax03036]
    111479843
Messenger RNA biogenesis [BR:cmax03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     111479843
Chromosome and associated proteins [BR:cmax03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    111479843
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_SPT8 Beta-prop_WDR90_POC16_2nd Beta-prop_HPS5 Beta-prop_DCAF12 Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st WD40_RFWD3 Beta-prop_IFT122_1st Beta-prop_SCAP
Other DBs
NCBI-GeneID: 111479843
NCBI-ProteinID: XP_022980460
UniProt: A0A6J1ITM9
LinkDB
Position
Unknown
AA seq 344 aa
MSAFANPNPNKSLEVAQPPSDSVSSLSFSPKANHLVATSWDNQVRCWEIMQNAGNVASTP
KASISHDQPVLCSAWKDDGTTVFSGGCDKQVKMWPLLSGGQAMTVAMHEAPVKEVAWIPE
MSLLVSGSWDKTLKYWDTRQPNPVHTQQLPDRCYSMTVRYPLMVVGTADRNLIVFNLQNP
QNEFKRIVSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDESLANKNFTFKCHRDGSE
IYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMLRCSQPISSSTFNQDGSIFAY
SVCYDWSKGAENHNPATAKTCIYLHLPQESEVKGKPRVGGSGRK
NT seq 1035 nt   +upstreamnt  +downstreamnt
atgtctgcatttgcgaatccaaaccctaataaatccctcgaggttgctcagcctccgagt
gattctgtgtcgagccttagttttagtccaaaggccaatcacttggttgccacttcatgg
gataatcaggttcgttgttgggaaataatgcaaaatgcgggtaatgttgccagtacgcct
aaggcttctatatctcacgatcaaccggttttatgctcagcgtggaaggacgatggaaca
actgtgttttctggaggctgcgacaaacaagttaaaatgtggcccttgttgtccggtggc
caagccatgactgtagccatgcatgaagcacctgtcaaagaagttgcgtggatccctgag
atgagcctattagtctctggaagctgggacaagacattgaagtattgggatacaaggcag
ccaaacccagtgcatactcaacaacttcctgatcgctgttattcaatgacagtgagatat
ccacttatggtagttggtactgcagacagaaatctgatagtgtttaacttgcaaaatcct
cagaatgaatttaagagaattgtttcacccttgaagtatcaaacaagatgtgtagctgcc
tttcctgatcagcaaggttttttggttggttcaattgagggaagggttggtgttcaccac
cttgatgagtctttggcgaataagaacttcacttttaagtgccacagggatggatctgag
atatattctgtcaactccttgaactttcatcccgtgcatcacacttttgcaactgcaggt
tcagatggtgcctttaatttctgggacaaggatagcaaacagaggctgaaggctatgtta
cggtgcagtcagcccataagtagtagcactttcaaccaggatgggtcgatatttgcatat
tcagtgtgctatgattggagtaaaggggcagaaaatcacaacccagcaacagcaaagact
tgcatttacttgcaccttccacaggagtctgaggttaaaggcaagcctcgggttgggggc
agcggaagaaagtag

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