KEGG   Cucurbita maxima (winter squash): 111480024
Entry
111480024         CDS       T05246                                 
Name
(RefSeq) sm-like protein LSM1B
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
cmax  Cucurbita maxima (winter squash)
Pathway
cmax03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cmax00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    111480024
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cmax03019]
    111480024
Messenger RNA biogenesis [BR:cmax03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     111480024
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     111480024
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 111480024
NCBI-ProteinID: XP_022980750
UniProt: A0A6J1IXE4
LinkDB
Position
Unknown
AA seq 144 aa
MSGGCVVLINSQSIMMVPSVLEYIFRTPCIGSYLDRKLLILLLDGRCIIGTMCTFDQYGN
VVVESAFERIFAENQYCDKPMGLLVVRGDNAIFIGEMDLSFPELPPHITAVSLPQILIAR
KAELQSSVFKRTLKKWMEELFDGI
NT seq 435 nt   +upstreamnt  +downstreamnt
atgagtgggggttgtgtagttttgattaattcacagtcaatcatgatggttccgtcagtc
ctcgaatacatcttccgaactccctgcatcggttcatatcttgaccggaaactactgata
ctgcttcttgatgggcgatgtatcattggcactatgtgtaccttcgatcaatatgggaat
gttgttgttgagagtgcgtttgaaagaatttttgcagagaatcagtattgtgataagccc
atgggtttgcttgtagttcgaggggataatgctatttttattggggagatggacctcagc
ttcccagaacttcctccccatatcactgctgtctcgctacctcagattctaattgctagg
aaagcagagttgcagtcatcagtgtttaaaagaaccttgaagaaatggatggaggaactg
tttgatggtatttga

DBGET integrated database retrieval system