Cucurbita maxima (winter squash): 111480230
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Entry
111480230 CDS
T05246
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog A-like
KO
K11267
sister chromatid cohesion protein PDS5
Organism
cmax
Cucurbita maxima (winter squash)
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmax03036
]
111480230
03400 DNA repair and recombination proteins [BR:
cmax03400
]
111480230
Chromosome and associated proteins [BR:
cmax03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
111480230
DNA repair and recombination proteins [BR:
cmax03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
111480230
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
HEAT_GCN1_C
DUF6017
HEAT_GCN1
Cnd1
Motif
Other DBs
NCBI-GeneID:
111480230
NCBI-ProteinID:
XP_022980925
UniProt:
A0A6J1IXY6
LinkDB
All DBs
Position
Unknown
AA seq
1233 aa
AA seq
DB search
MDESSLQLIHDVGTKLSKQSRPTKDYIVKSLRQVVDAFACLEQSYVPDATRESEPAKKLE
GSIKPLMKSIVNGLLRNRDKDVRLLLAICVSEMFRVTAPEPPFEDKYLRDVFILLLSSFS
ELGDTTSPLFPRRVKILETVARCKCCVIMLDIGCNDLVLDMFDTFFSALRDYHEPSLVNN
ILSIMTHILSEDASLPLVDVVLHNVVKEEKGEPTAASRLAVSVIEASAETLEPFVCGFLT
SCISERDVAGSELKEFYHELIFRIFQCVPQMLLPVIPNLTLELLTDQVDVRIKAVKIVGR
LLALPKYSVAQKYRGLFMEFLKRFSDKSAEVRIHAIQCAKDCYLANPGSSESLEVLAAVE
ERLLDFDDRVRTRAIIIVCDIARSNIKFAPVTLISRAAERLRDKRISVRKKALQKLLEVY
RDYCDKCSKGQLTMNDDFEQIPCKVLMLCYDKDCKEFRSQCMELVLVEDLFPAHLSLEER
TSHWIHLFSLFNIHHEKALRYILLQKQRLQDELRTYLSLRKKGKENQSEEVEKRIETAFL
KMAACFPGPTKAKESFHKLNQIKADNIFIPLELLLDELTSVEAEATRDKLLRMIGSKHPH
FEILKSLSSKCSYNLFSTEHVRFVLDCILSNRLANKHLEASAGKLLLAIFGIFPALIRGL
EGQLLRLLEESNPIDSKLIEVLAKAGPHLSIELSDAYPFLERLCLEGTRAQSKSAVSAIA
ALAGTSGYFLFSKLCKELVDSLHRGMNLPAILQSLGCIAKYSVSTFDDHDLEITPYVYEK
ILQVDLSDNFNKLDGDSNSCDLKIYGLKTIVKSFLPHQGTPRRNVDEFLKILLGMLNTCE
ASVGNIPTDSDQARIRLAAAKSVLRLARRWDSQITPEIFRFAILMAKDSSSLVRRLFIDK
AHKLLKEQAIPTRYACVFAFCISDSLKDLQDDSLKYMAEFIEQYRKIAQIHQNSVGQDGS
VTFVPAYIVVFLIYILAHDSGFPHTDCQDENEYAQFCSPLLFMLQMLVNADVIVAKDSVL
YLHSIFRAIKRVEDAVDIETSPKLHILADIGLSFVTALNYSGVSLSCAPRQILLPLSLYR
VNSRQLSQHALDECFIGRVIKTFQSQFILPTINPCSSISMKACKQVEAISSRATKINKTV
NQEAIVGRRRKRAVSPTMSSSIELRESSLLVQQNFPTNREKSAFSSQCETTEASLVEAYA
SIQSQDNVLANRNIDDESSMYVNDQLTNSPKIS
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atggatgagtcttcgctgcaacttatccacgatgtcggaactaaattgagcaaacagtct
cgtccaaccaaggattacatcgtgaaatccctccggcaagttgtagatgcttttgcttgt
ttggaacagtcttacgtcccagatgctacaagggagtcagaaccagctaaaaaattagag
ggttctataaagcctctaatgaaatctatagttaatggtcttttacggaatagagataaa
gatgtgagacttctattagctatatgcgttagtgaaatgttccgggtcacggctccagaa
ccacctttcgaagacaaatatctaagggatgtttttatacttcttttgagctctttttcg
gagctaggtgatacaacaagtccacttttccctcggagggttaaaatactagagacagtg
gcacgatgtaaatgctgtgtgataatgcttgacattggatgcaacgacttggtgttggat
atgtttgatacatttttctctgctttaagagactatcacgaacctagtctggttaacaac
attttgtcaataatgacccatattctaagcgaggatgcctctctaccgctagtagatgtg
gttttgcacaatgttgtgaaggaggaaaagggtgaacctacagctgcttctcgccttgca
gtttccgtcattgaagccagtgctgagacgcttgaaccatttgtttgtggattcttaaca
tcttgtatttcagagagagatgtggcgggaagtgaactcaaagaattttaccatgaacta
atttttagaattttccaatgtgtccctcagatgcttcttcctgtgattccaaacttgact
ctagagcttttgacggaccaagttgatgttagaataaaagcggttaaaatcgttggtagg
cttttagctctaccaaaatactctgtagcacaaaagtaccgaggactttttatggagttc
ttgaaaaggtttagtgacaaatctgcagaagttagaattcatgctatccaatgtgctaaa
gattgttatctggccaatcctggtagttcagaatctcttgaagttctggctgcagtcgaa
gaacgattactagacttcgatgacagagtgagaactcgagcaataattattgtttgtgat
attgcccgatcaaatatcaaatttgcccccgtgacactaatatctcgagctgctgaaaga
ctacgagataagaggatatcagttaggaaaaaggcccttcagaaattgttggaagtgtat
cgagactattgtgataaatgttccaaaggtcaattgactatgaacgatgactttgaacag
attccttgtaaagtcttgatgctttgctatgataaagattgtaaagagttcaggtcccag
tgcatggaacttgttcttgtggaagatttattcccagctcatctctctcttgaggaaagg
acaagccactggatccatttgttctctcttttcaatatccatcatgaaaaggccctcaga
tatattttgttgcaaaaacagaggttacaagatgagttgcgtacttatttgagtctacga
aaaaagggcaaggagaaccaatcagaagaggtagaaaagcgaattgaaactgcatttctc
aaaatggcagcctgctttccaggtcctacaaaagcaaaggagtcctttcataaattaaat
caaattaaagctgataatatttttatcccgttggagcttttacttgatgaattgacaagt
gtggaagctgaggccaccagagacaaattgttgaggatgataggaagtaaacatcctcat
tttgagattttgaaatcactctcctcaaagtgctcatataatttattcagcactgagcat
gtacgctttgtattagactgcattctgagtaacagacttgcaaataaacatttggaggct
tctgctggcaagctcctactggctattttcggcattttccccgcactcatcagaggcttg
gaaggccaactgctaaggttgttggaagaaagcaacccaatagatagtaagctgatcgaa
gtattggcaaaagcaggccctcacttatcaattgaactcagtgatgcatacccatttctg
gagagattatgcttggagggtactcgtgctcaatcaaagagtgctgtttctgccattgca
gctttagctggtacttctgggtattttttattctctaaactatgtaaggaacttgttgat
tctctacacaggggaatgaatctccccgcaatattgcaatctttaggttgtattgcaaaa
tattctgtttcaacctttgatgatcatgatctagagatcacaccttatgtatatgagaaa
atcctccaagtggacctatcagataatttcaataaattagacggggatagcaattcttgc
gatttaaagatttatgggctgaaaacaatcgttaagagttttttgccacatcaaggaact
cctagaagaaatgttgatgagtttctgaaaattttattagggatgctgaacacgtgtgaa
gcttctgttgggaacatccctactgatagtgatcaagctcgaatcagattagctgctgca
aaatcagttcttcgtcttgccagaagatgggattcacaaattacaccggagattttccgt
tttgcaatcttgatggcaaaggactcctcttctttggttagaaggctatttattgacaaa
gcacacaagttacttaaggagcaggctatacctactcgatatgcttgtgtttttgcattt
tgcatctcagatagcttgaaggatcttcaggatgattcactcaaatatatggcagaattt
attgagcaatataggaagatagctcagattcatcaaaattctgtgggtcaagatggatca
gtgacctttgttccagcgtatatagtagtattcttgatatatattctagctcatgattca
ggcttcccacatacagactgtcaagatgaaaatgaatatgctcaattctgtagccccctc
ctatttatgttgcagatgttagtcaatgcagatgtaattgttgcaaaggattctgttttg
tatttgcacagtatttttcgtgccattaagagggttgaggatgctgtggatattgaaaca
tcacctaagttacacattttagcggacattggtctctcttttgtaactgctctaaattat
tccggagtctccctatcatgtgccccaaggcagattttgctgccattatcactatataga
gtaaattccaggcagctttctcaacatgctttggatgaatgttttattggaagagttatt
aagacatttcaatctcaattcattttgcccactatcaacccatgttcctcaataagcatg
aaagcttgtaagcaagttgaagccatttcctctagagcaacgaagatcaataaaactgtg
aatcaggaggctattgttggacggaggcgaaaacgggctgtctctccaacaatgtcctca
tcaattgagttgcgggagagttctctacttgttcaacaaaatttcccaacaaacagagaa
aaaagtgcattttcttctcagtgtgaaactacagaagcttctcttgttgaagcatatgcg
tcaattcagagtcaggacaatgtgttggcaaacaggaacattgatgatgagtcttcgatg
tatgtcaacgaccagctcactaattctcccaaaatttcttaa
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integrated database retrieval system
