Cucurbita maxima (winter squash): 111480241
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Entry
111480241 CDS
T05246
Name
(RefSeq) SWI/SNF complex subunit SWI3C-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111480241
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmax03021
]
111480241
03036 Chromosome and associated proteins [BR:
cmax03036
]
111480241
Transcription machinery [BR:
cmax03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
111480241
Chromosome and associated proteins [BR:
cmax03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
111480241
PBAF complex
111480241
GBAF(ncBAF) complex
111480241
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
Ig_CycH
ZZ
Motif
Other DBs
NCBI-GeneID:
111480241
NCBI-ProteinID:
XP_022980941
UniProt:
A0A6J1IV14
LinkDB
All DBs
Position
Unknown
AA seq
805 aa
AA seq
DB search
MPASPSFPSGSRGKWKKKKRDTQIGRRNSYGNSNNNGSNKHDDDDEDEDLATVENEEMER
DNDDSEDPQPTPNSSLQETELLSDDKMRVSEFPQVVKRAVTRPHSSVLAVVAMERANQSK
VLSGNPLILENVSYGQLQALSAMPADSPALLDQERVEAGNAAYVITPPSIMEGRGVVKRF
GSRVHVVPMHSDWFSPATVHRLERQVVPHFFSGKLPDRTPEKYMEIRNFVVAKYMENPEK
SVTVSDCQGLVNGVSNDDLTRIVRFLDHWGIINYCAPTPSCEPWNRSSYLREDMNGEIHV
PSAALKPIDSLIKFDKPKCRLKAADIYSERSCHDDNDDLCDLDNRIRERLAESHCSSCSR
TVPIVCYQSQKEVDVLLCTDCFHEGKYVAGHSSIDFLRVDMTKDYGELDSENWTDQETLL
LLEAIELYNENWNEITEHVGSKSKAQCIIHFLRLSVEDGILENVDVPGVPLSSNSSHGKD
NEKSHSNINGNVAGSSSQDNKEMHDRLPFANSGNPVMALVAFLASAIGPRVAASCAHASL
AALSEDSEASSGSIFQVEGSVNPSRTNVEVTHVRDGGSYGKLPNSVKLKDENKAETEVTL
LSAERVKVASKVGLAAAATKAKLFADHEEREIQRLSANIINHQLKRLELKLKQFAEVETF
LMKECEQVERTGQRFVAERARMLGVQFGAAGVSSPASLPGVIPPVVNNNRVSSPASRPNV
ISPPPSQPSVSGYGNNQPLHPHMSYVPRQSMFGLGQRLPLSAIQQQQQLASTTSSNAMFN
GPSNAQASLSHPMMRPVTGSSSGLG
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgccagcatctccttccttcccatctggatctcgcggaaaatggaagaagaagaagagg
gacacgcaaattggccgtagaaacagctatgggaatagtaataacaacggaagcaacaag
cacgatgatgatgatgaagatgaagatcttgccactgttgaaaatgaggaaatggaacgc
gataacgacgattctgaggaccctcagccgacgcccaattcgagtcttcaggagactgag
ctcttgtcggatgataaaatgcgagtctctgagtttcctcaggtggtcaagcgggctgtc
actcggcctcactcttctgtgttggctgttgtggcaatggagagggcaaatcaaagtaag
gtgctgtctgggaatcccttgattttggagaatgtgtcttacgggcagctgcaggcgctg
tctgctatgcctgcggatagtccggctttgctggatcaagagagggtggaggctgggaat
gcggcgtatgtgataactccaccatcgattatggaaggtcgtggcgtggtcaagaggttc
gggagtagagttcatgttgttcctatgcactcagattggttttcacctgctacagtgcat
cgactcgagagacaagttgttccacattttttctctgggaaattgcctgaccgcactcct
gagaagtatatggaaatccgaaactttgttgttgccaaatacatggagaatcctgagaaa
agcgtcacagtttcagactgccaaggattagttaatggtgtcagtaatgacgatttaact
cgaattgttcgatttcttgatcattggggtattattaattattgtgccccgacacctagt
tgtgaaccatggaatagaagttcatacttgagagaagatatgaacggtgagattcatgtg
ccatcagctgctttgaagcctattgatagcttaatcaaatttgacaaaccaaaatgtagg
ctcaaggcagccgatatctattcggaacgttcatgccatgatgacaatgatgatttatgt
gatttggataacagaattcgggagcgtctagctgaaagtcattgtagctcgtgttctcga
acagttcccattgtatgctaccaatcacagaaggaggtagatgttttactttgcaccgac
tgcttccatgaaggaaaatatgttgctggtcattcgagcatcgattttctgagggtggac
atgacgaaagattatggcgaactagatagcgaaaattggaccgatcaagaaactctgttg
cttttagaggcgatagaattgtataatgagaattggaatgaaataacagaacatgttggg
tccaagtctaaagctcaatgcattatacattttctccgtctatcagttgaagatggtatt
ctagaaaatgttgatgtgcctggtgttcctctctcatccaattcttcacatggaaaagat
aacgagaagtcacattcaaatattaatggaaatgtagccggatcttcctctcaagacaat
aaagagatgcatgatagactaccatttgctaattctgggaacccagtcatggcgttggtt
gcttttcttgcatctgctattggaccaagagttgctgcatcttgtgcccatgcatcctta
gctgcattatctgaggacagtgaagcttcttctgggagcatatttcaagtggaaggttct
gtgaatcctagtaggacgaatgtggaggtcacacatgtcagagacggtggctcctatgga
aagcttccaaattcagtcaagctaaaagatgagaataaggcagagacagaggtaacacta
ttatctgctgaaagagttaaagttgcatcaaaagtaggtcttgctgccgctgcaacaaag
gctaaattgttcgcagaccacgaagaacgagaaatccaacggttgtctgctaatattata
aatcatcagttaaaaagacttgagttgaagctgaagcagtttgcagaagtagaaaccttc
ttgatgaaggaatgcgaacaagtcgagaggacagggcagagatttgttgcagaacgagct
cgaatgttaggtgtccaatttggagctgctggagtcagctcacctgcgagtttaccgggg
gttattcctcccgtggtaaacaacaatagggtgagctcacctgcgagtaggccgaatgtg
atctcgcctccaccatcccagccaagcgtttcggggtatggcaacaaccaaccacttcat
ccccacatgtcgtacgtgcccaggcagtcgatgtttggcttggggcaaaggctgcctttg
tcagcaattcagcagcagcagcagctggcctcaacgacttcgtctaatgctatgttcaat
ggcccgagcaatgcacaggcttctctcagtcacccaatgatgaggccagttactggatcc
agctctggattaggctga
DBGET
integrated database retrieval system
