Cucurbita maxima (winter squash): 111480252
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Entry
111480252 CDS
T05246
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
cmax
Cucurbita maxima (winter squash)
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
111480252
Enzymes [BR:
cmax01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
111480252
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
111480252
NCBI-ProteinID:
XP_022980958
UniProt:
A0A6J1J0S6
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Position
Unknown
AA seq
634 aa
AA seq
DB search
MSSRGVRLQIRDHHVVVDNGILQLTLSKPDGIITGIHYNGVDNLLEVLNPESNRGYWDIV
WNSPGSQGIFDVIKGSSFRVIVENEEQVELSFTRMWDPSLEGKVVPLNIDKRFIVLRGSS
GFYSYAIYEHLKDWPDFDIGETRITFKLRKDKFQYMAVADNRQRLMPLPDDRLSGRCQTL
GFPEAVLLTNPKNPEHRDEVDDKYQYSCENKDLKVHGWISNNPPIGFWQITPSDEFRSGG
PHKQSLTSHVGPTTLAIFLSTHYAGQDLVPKFRNGEPWKKVFGPVFLYLNSTKAGDDPFW
LWEDAKIQMMAEVQSWPYSFPASDNFPKLDQRGTISGRLLVFDRYMSRDYLPASGAFVGL
SAPGEVGSWQRECKGYQFWTRADDRGYFIINHVHIGQYNLYAWVPGFIGDYRCDALINIS
QGSSIELGNLVYEPPRDGPTLWEIGIPDRSASEFYIPDPNPMHINKLFVNHPERFRQYGL
WERYAELYPDEDLVYTVGTSDYSKDWFFAQVPRKTNNNSHQGTTWKIAFKLDRVDRKSRY
MLRVAIASATLAELQVRVNDPSSKRPLFTSGLIGRDNSIARHGIHGIYWLYSVGIAGLHL
VEGDNAIFFTQPRCTSPFQGIMYDYIRLEGPSTN
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcccggggagtgcgattgcagataagagatcatcatgtggtcgtagataatgga
atactgcaactaactttatcaaaaccagacggaattatcactggcatacattataatggt
gttgacaatctgcttgaagttctcaaccctgaatctaacagagggtattgggatattgtt
tggaattctcctggaagccaggggatatttgacgtgattaagggatcaagttttagggtt
atagtggaaaatgaggaacaggttgagctttcgtttacaaggatgtgggatccgtccctc
gagggcaaggttgttcctttgaatatcgacaagaggttcatagtactacgtggttcctct
ggattctactcttatgctatttatgaacacttgaaggattggcctgattttgatattggt
gaaactaggatcacttttaaactcagaaaagataagtttcagtacatggctgtagctgac
aacaggcagagattgatgcccctgcccgatgatcggttatcaggcagatgccagactttg
ggcttccctgaagctgtcttgcttaccaatcccaagaaccctgaacacagggatgaggtg
gatgacaaataccaatactcatgtgaaaataaagacttaaaggtccatggatggataagc
aacaacccgcccatcgggttctggcaaattacaccgagcgatgaatttcgatcaggcggg
ccacataagcagagtttaacatcccatgtgggacctacaactcttgctatatttcttagt
actcattatgcgggacaagatttggtgccaaaatttagaaatggcgagccatggaagaaa
gtttttgggcctgtttttctttatcttaattccactaaagctggagatgatcccttttgg
ttatgggaggatgctaaaatacagatgatggcagaagtccaaagttggccatacagtttc
cccgcctccgacaatttcccgaaactggatcaacggggtaccattagcggtaggcttctg
gttttcgacaggtatatgagccgagactatcttccagccagtggagcgttcgtcggattg
tctgcaccaggagaagtagggtcatggcagagagaatgcaagggatatcaattctggact
agagcggatgatcgtggctattttatcatcaatcacgttcacattggccaatataatcta
tatgcatgggtccctggcttcattggagattaccgttgcgatgccttaatcaacataagc
caaggatctagcattgaacttggcaatcttgtttacgaacctccaagagatggcccgaca
ctatgggaaataggcattcccgatcgctcggcatcggagttctacattcctgatcctaat
ccaatgcatattaataagctctttgtaaatcatcctgaaaggtttcgacagtatgggttg
tgggagaggtacgctgaattatacccggacgaggatttagtatacactgttggcacaagt
gattatagtaaagattggttctttgctcaggtcccaaggaagacgaacaataattcacat
caaggaactacctggaaaatcgcattcaaactcgatcgagtagatcgcaagagtaggtat
atgctacgagtcgcaatcgcatctgcaactcttgctgaattgcaggttcgggttaatgat
ccgagttcaaagcgacctttgtttacgagcgggttgatagggagagacaactcaattgca
agacatggaattcatggaatttactggctttacagcgtgggcatagcaggcttacacctt
gttgaaggagataacgcaatcttctttactcagccacgctgcaccagccctttccaaggt
atcatgtatgattatatccgtctggaaggtccttcaacaaactga
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