Cucurbita maxima (winter squash): 111480556
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Entry
111480556 CDS
T05246
Name
(RefSeq) small RNA degrading nuclease 5-like
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
111480556
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cmax03009
]
111480556
Ribosome biogenesis [BR:
cmax03009
]
Eukaryotic type
Pre-60S particles
RNases
111480556
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-GeneID:
111480556
NCBI-ProteinID:
XP_022981433
UniProt:
A0A6J1J229
LinkDB
All DBs
Position
Unknown
AA seq
576 aa
AA seq
DB search
MPSSGVSALDSEEEGRSNVGKTKENPSFFDIYGTDAKAEILFKTPESNSTLSLQDVQGLV
TWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQTKILPTFKKLCGNPRAVLAL
SCISDRMQTIDALLTCKVKRKRDANSVDLKNNLTSEQERFGPEKETPISIKLPKELPFPV
TYYTLTAKELEDNGYPFNQPGFIHTLPAPIGSSPYEMLALDCEMCVTCEGFELTRITLVD
MEGQVVLDKLVKPSNAIVDYNTRFSGITFEMLSQVTTSLEDVQKVFLNLVHKETVLIGHS
LENDLMALKISHDLVIDTAVLYKHPRGGSHKSALRILTKKFLSREIQQSGNGHDSIEDAR
ATMELALLKIKHGPEFGSPPSLIRKKLLTILGENGKTSSFIDDVSTVKRYSSESSHAFPV
TSDDEALSRAKKEVMNERVHFIWTQFSELNSYHKKQVDDEERLNVKLAELLSLLTCDSKS
VNKKRNSRKISVELREILSRMDSRIKDLYTSLPTNAMLIVCTGHGDIALVQRLRKMLKEQ
SETMISREKIVKILEDLHAQAEVALCFASIKHSSVL
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcttccggtgtttcagccttggattcagaagaagaaggcaggtcgaatgtgggt
aaaacaaaggagaaccccagcttctttgatatatatggaaccgatgccaaagctgagatt
cttttcaaaactcccgagtctaattcaactttaagtctgcaagatgttcaagggcttgta
acttgggtgcttgctgaaggtttcatgccatcatgggttttcattaagaataaacccctg
atccccaaagtggttatggtttatctccctggcctggatgctgctctgtacatgtcacag
accaagatacttcctacgtttaaaaaattatgcggcaatccgagggcagttttagctctt
agctgtatatcagatagaatgcaaacaattgatgcacttttgacatgtaaggtgaagaga
aagagggatgcaaatagtgtagacttaaagaataatttgacgtctgaacaagaaagattt
ggccctgaaaaagaaacaccgatatctatcaaactcccgaaggagttacctttccctgtt
acatattatacgctaactgcaaaagaactggaagacaatggctatcctttcaatcaacca
ggttttatacatacacttcctgctcctattggatcttcaccttatgaaatgttggcgctt
gactgtgaaatgtgtgtgacctgtgaagggtttgagctcacaagaataaccctggtggat
atggaaggacaggttgtccttgacaaattggtaaaaccatcaaatgcaattgttgattac
aatacgaggtttagtggaattacatttgagatgttaagtcaggtgaccactagtctggaa
gatgttcagaaagtttttttgaatctagttcacaaggagaccgttctaattggtcattca
ctggagaatgacctgatggcattaaagatctctcatgatctggtgattgatactgcagta
ctgtataagcatccccgtggcggctctcataaatctgcccttcgaatccttaccaaaaaa
tttctttccagggagatacaacaatctggcaatggccatgatagtattgaagatgcaaga
gctactatggaacttgcacttcttaaaattaaacatggacccgagtttggttcacctcca
tcattaatcaggaaaaaactacttactatacttggtgagaatggaaagacgtcttctttc
atcgatgatgtttcaacagtgaagcgatattcctcagaatcatcgcatgcatttcctgta
acttctgatgatgaagctctttccagggcgaaaaaagaggtaatgaatgaaagagtacac
ttcatatggacacaattttcggaattgaattcttaccataagaagcaagtagatgatgaa
gaaagattgaatgtcaagcttgcagagttattgtcattacttacatgtgattcaaaatct
gtaaacaagaaaaggaacagccgcaaaatctctgttgaactacgggaaattttgagccgc
atggattccagaatcaaggacctttatacctcgttacctactaatgctatgcttattgtt
tgcactggtcacggtgacatagcacttgtacagagattgaggaaaatgctaaaggagcaa
agtgaaacaatgatatcccgtgagaagattgtcaaaatcttggaagacctccatgcccaa
gctgaagtagctctctgttttgcttctataaagcattcatcagtactctaa
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