Cucurbita maxima (winter squash): 111480635
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Entry
111480635 CDS
T05246
Name
(RefSeq) CCR4-NOT transcription complex subunit 9-like
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111480635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmax03019
]
111480635
Messenger RNA biogenesis [BR:
cmax03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
111480635
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
111480635
NCBI-ProteinID:
XP_022981552
UniProt:
A0A6J1IU99
LinkDB
All DBs
Position
Unknown
AA seq
323 aa
AA seq
DB search
MSNLPQSLSMSAAFGGPGPGPGPSIPSASGAPPNKERKMASSEQLVLDLSNPDLRENALL
ELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCV
ASHSDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLS
TEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVAAL
SEQPSSRLLKHIIRCYLRLSDNPKACDALRSCLPDMLRDATFNGCLRDDATTRRWLQQLL
HNVGMSRVPALQAGAGFDHMMVN
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatctccctcaatcactctccatgagtgctgcgtttggaggtcctggtcctggt
cctggtccgtccatccccagtgcctctggagctccaccgaacaaggagcgtaaaatggct
tcttcggagcagttggtgctcgacctcagcaatccggatctccgtgagaacgctctactt
gaactttcgaagaagagggagctgtttcaagatttggccccattgttgtggaactctttt
ggaaccattgctgccttattgcaagagattgtatcaatatatcctgttctttcaccccca
aatctaacccctgcacagtcaaatagagtttgcaatgctcttgctcttcttcagtgtgta
gcctctcactcagatacaaggatgttgtttctcaatgctcacataccgttgtatttgtat
cctttccttaacacaacaagcaagtcaaggccttttgagtacttgcgccttactagcttg
ggtgtcatcggtgcgttggtgaaggtagatgatactgaagtaatcagttttcttctgtcc
actgaaataattcctctatgcctgcgtaccatggaaatgggaagcgagttgtcaaaaaca
gttgcaacatttattgtgcagaaaattttgctggatgatgtggggttggattatatttgt
actacagctgagcgattttttgctgttggtcgagttctggggaacatggtagcagctctt
tctgaacaaccttcctctcgtctgttgaagcacataatacgatgttatcttcgattgtcc
gataacccaaaagcttgcgatgccttaaggagctgtcttccagatatgttgagagatgct
actttcaatggctgcctccgggatgatgcgaccactaggaggtggctgcaacagttgcta
cacaatgtaggaatgagtagagttccagcacttcaggcaggggctggatttgaccacatg
atggtgaactag
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