Cucurbita maxima (winter squash): 111480826
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Entry
111480826 CDS
T05246
Name
(RefSeq) pre-mRNA-processing protein 40A-like
KO
K12821
pre-mRNA-processing factor 40
Organism
cmax
Cucurbita maxima (winter squash)
Pathway
cmax03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmax00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111480826
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmax03041
]
111480826
Spliceosome [BR:
cmax03041
]
Complex A
U1 snRNP components
U1 related factors
111480826
Complex B
111480826
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
FF_PRPF40A
WW_TCERG1
Motif
Other DBs
NCBI-GeneID:
111480826
NCBI-ProteinID:
XP_022981783
UniProt:
A0A6J1J315
LinkDB
All DBs
Position
Unknown
AA seq
943 aa
AA seq
DB search
MLDVLLCSEMDNLSQSSGGQFRPNIPAQPGQTFISSSAPQFQSAGQNISSSNVGIPAGQV
QPHQYPQSVPQFVPRPSHRGYITPLSQGIRMPYVPTRSLTSVPPQSQQNVPAPNNQMHGL
GSHGLSISSPYTPMSQMHVPVGVGKSEPLMSSVSQATNPVSQIEQANQHSSVSTVNLAAN
VPVFNHPSDWQEHASADGKRYYYNKKTKQSSWEKPLELMTPLERADASTVWMEFTSPDGR
KYYYNKVTKESKWTMPEELKLAREQAQKESVQGTETDMAVTTSQPTPIVGLFHAETPAIS
TISSSISPTVSGVALSPVPAALFVSGPPAVVHANASSMTTFESLASQDVKNPVDETSTED
IEEARKRMAVAGKVNETVLEEKYADDEPLVFANKLEAKSAFKALLESVNVQSDWTWEQAM
REIINDKRYGALKTLGERKQAFHEYLGHRKKLDAEERRIRQKKAREEFIKMLDESKELTS
STRWSKAVSMFENDERFKAVERSRDREDLFETCIVELERKEKERAAEEHKKNITEYREFL
ESWDYIKVSSKWRKVQDRLEVDERCLYLEKLDRLLIFQDYIRELEKEEEEQKKIQKGRLR
RIERKNRDEFRQLMEEHIIAGVLTAKTFWRDYCLKVKELPQYQAVASNISGSTPKDLFED
VLAELKTKYHKEKAQIKDVMKAAKVTITSSWTFDDLKAVLEEGAPLALSDINFKLVYEDL
LERAKAKEEKEAKRRQRLADDFSRLLQLFKEISASSNWEDSKQLFEESEDYRSIGEETFA
KEVFEEYVVHLQEKAKEKERKGEEEKAKKEKECEEKEKERKEKEREPEKEKGRVKKDETD
SENIDANETREKKREKNKDRKHRKRHHSATDDGGSNKDEREESKKFCKRGSDRKKSRKHA
YSPESDSESRHRRHKREHRDGSCRNGGHDELEDGELGEDGEIQ
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgcttgacgttctgttatgctctgaaatggataatctatctcagtcttcaggcggacag
tttcgaccaaatatcccagcacaaccaggccagacgttcatttcctcatctgccccacag
ttccagtcagcagggcagaatatatcttcttcaaatgttggaattccagctggtcaagtc
cagccacatcagtatcctcaatcagtgccacagtttgtgccaaggccaagccatcgaggc
tatatcactcctttgtcccagggtattcgaatgccttatgttccgacaaggtctcttact
tctgttccacctcagagtcagcaaaacgtgcctgcaccaaataatcaaatgcatggtctg
ggttctcatggactatctatttcttcaccatatactccaatgtcacaaatgcatgtacct
gttggagttggtaagagcgaacctttgatgtcttctgtcagccaggctacaaacccagtc
tcacagattgagcaagctaaccagcattcttcagtttctaccgtaaacctagctgctaat
gttcctgtcttcaatcatccatctgattggcaagagcatgcatcagctgatggaaaaaga
tactattacaacaaaaaaaccaaacagtccagttgggaaaagccattggaacttatgaca
ccacttgagagagctgatgcatcaactgtgtggatggaatttacatctccagatggaaga
aagtactattacaataaggtgacaaaagaatcaaagtggaccatgccagaagaactgaag
ttggctcgcgagcaggctcagaaagaatctgtccaaggaacagaaacagatatggctgtt
acaacgtctcaacctacacctattgttggtcttttccatgctgaaacgccggcaatttct
accattagctccagcatttctccaactgtgtctggggttgcattgagtccagttccagct
gctctttttgtttctggtcctcctgctgtggtccatgccaatgcttcgtcaatgactact
tttgaaagccttgcatctcaagatgtaaaaaatcctgttgatgaaacttctacggaggac
attgaggaagcaaggaagagaatggcagttgcaggaaaagttaatgagactgtcttagag
gaaaaatatgctgacgatgaaccattggtattcgccaacaagctggaggcaaagagtgca
tttaaagcgcttctggaatctgtaaatgttcagtctgattggacgtgggagcaggctatg
cgagaaataattaatgacaaaagatatggcgccttgaaaactcttggtgagcggaagcaa
gctttccatgagtatttaggacatagaaaaaagttggatgcagaagaaagacgcataaga
cagaaaaaagctcgtgaggaattcatcaagatgttggatgagtccaaggaactcacatca
tctaccagatggagcaaagctgttagtatgtttgagaatgatgaacggttcaaagccgtt
gaacgttctagagatcgggaggatctttttgaaacctgcatagtggaacttgagaggaag
gaaaaagaaagggctgcagaggagcacaagaaaaatattactgaatatagggaatttctc
gagtcttgggattacataaaggtgagtagcaaatggcggaaagtacaagatcgattggaa
gttgatgagagatgcttataccttgagaaacttgatcgcttgcttattttccaggactat
atacgtgagttggaaaaggaggaagaggaacagaagaagatacaaaagggacgtttgcga
agaattgaaagaaaaaaccgcgatgagttccgccaactcatggaagaacacattattgct
ggtgttcttacagctaagactttttggcgtgattactgtttgaaggttaaggagttgcct
cagtatcaagctgttgcttcaaatatatctggctcaacaccaaaggacttgtttgaggat
gttctggcggaattaaagactaagtatcacaaagaaaaggctcagataaaagatgtgatg
aaggcagcgaaggttaccatcacttcatcatggacatttgatgaccttaaggctgtcctt
gaagagggtgctcctcttgcactttcagatataaattttaagcttgtatatgaggattta
ctagaaagagccaaagcaaaggaggagaaagaagccaaaaggcgtcaacgtttggctgat
gacttctcaagactgcttcagttattcaaggagatttcagcttcttccaactgggaggat
agcaaacagctttttgaagagagtgaagactacagatcaattggggaagagaccttcgcg
aaggaagtttttgaggaatacgtagtgcatttacaagaaaaggcaaaagaaaaggaacgc
aagggtgaggaggagaaggctaaaaaggaaaaagaatgcgaggaaaaggagaaagagcga
aaggagaaggaaagagaacctgaaaaagaaaagggacgtgttaagaaggatgaaactgat
agcgaaaatatagatgcaaacgaaactcgagaaaagaaaagggaaaaaaacaaagacagg
aaacatcggaagcggcatcatagtgccactgatgatggtggttctaataaagatgagaga
gaggagtctaagaagttttgcaaacgtggcagtgaccgaaaaaagtcaaggaagcacgca
tattcacctgaatcagacagtgagagtaggcacagaagacacaagagagaacatcgagat
ggttcatgtagaaatggcggacatgatgaacttgaagatggggagcttggagaggatggg
gaaattcaatag
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