Cucurbita maxima (winter squash): 111481558 Help Entry 111481558         CDS       T05246                                  Name (RefSeq) splicing factor 3B subunit 3   KO K12830   splicing factor 3B subunit 3 Organism cmax  Cucurbita maxima (winter squash) Pathway cmax03040   Spliceosome Brite KEGG Orthology (KO) [BR:cmax00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     111481558  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:cmax03021]     111481558    03041 Spliceosome [BR:cmax03041]     111481558    03036 Chromosome and associated proteins [BR:cmax03036]     111481558 Transcription machinery [BR:cmax03021]  Eukaryotic type   RNA polymerase II system    Coactivators     SAGA/TFTC/STAGA complex      111481558 Spliceosome [BR:cmax03041]  Complex A   U2 snRNP components    U2 snRNP specific factors     111481558  Complex B     111481558  Complex C    U2 SnRNP specific factors     111481558 Chromosome and associated proteins [BR:cmax03036]  Eukaryotic type   Histone modification proteins    HAT complexes     STAGA complex      111481558     TFTC complex      111481558 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_RSE1_2nd Beta-prop_RSE1_1st CPSF_A MAP1B_neuraxin Motif Other DBs NCBI-GeneID:  111481558 NCBI-ProteinID:  XP_022982808 UniProt:  A0A6J1J5X2 LinkDB All DBs Position Unknown AA seq 1375 aa AA seqDB search MAVSEEECSSAKSRSSSSSSSSTYYLAKCVLRGSVVLQVLYGHIRSPSSLDVVFGKETSI ELVVIGEDGVVQSVCEQPVFGTIKDMAILPWNERFRPSYTQMLGKDLLIVISDSGKLSFL TFCNEMHRFLPVTHIQLSNPGNSRNQVGRMLASDSSGCFIAASAYENRLALFSTSVSAGS NIVDKRITYPPDGEGDSVVPRSMQKASICGAIWSMCFISKDHGHLTKDNNAVLAVLLNRK GAILNELLLLGWNIREQTIHVLSQFLEDGPLAYEVVEVPQSYGFALLFRVGDALLMDLRD AYSPCCVYRIGLHFTPNVEQNFIEESYRVQDADDEGLFNVAACALLELRDYDPMCIDSDD GSLNTNQNLVCSWSWEPGNNRNRRMIFGMDTGELFMIEMNLDSDGLKVNQSACLYKGLPY KALLWVEGGYLAALVEMGDGMVLKLENGRLIYANPIQNVAPILDMSVVDKHDEKQDQMFA CCGMAPEGSLRIIRNGISVESLLRTAPIYQGITGIWTIKMKLNDAYHSYLVLSFVEETRV LSVGLSFIDVTDSVGFQSDICTLACGLLDDGLLVQIHQNAVRLCLPTKVAHSEGIELSSP ARASWFPDNIGISLGAVGHNVIVVSTSNPCFLFILGVRKVSGYDYEIYEKQYLRLQNELS CISIPEKHFTKKESNFFMNSVENSIMSTLLNGVSSDYIIVIGTHRPSVEILSFVPSIGLR VLASGTISLMNILGNAVSGCIPQDVRLVLVDGFYILTGLRNGMLLRFEWPHSTMMNSSDM PMQSPVIPFLLTSPDSFNKELHNTTILEKHEDEIPSSLQLIAIRRIGITPVFLVPLTDWL DSDIIVLSDRPWLLHSARHGLSYTSISFQPSTHVTPVCSAECPNGLLFVAESSLHLVEMV HSKRLNVQKFHLGGTPRKVLYHSESKLLLVMRTQLINDTCSSDICCVDPLSGSILSSFKL EMGETGKSMELVRNGNEQVLIVGTSLSSGPAIMPSGEAESTKGRMIVLCLEHVQNSDTGS MTFCSKAGLSSLQTSPFREIVGYATEQLSSSSLCSSPDDASSDGIKLEETEAWQLRVVYS TTLPGMVLAICPYLDRYFLASAGNAFYVCGFPSDSFQRVKRLAVGRTRFMITSLTAHVTR IAVGDCRDGILFFSYQEDAKKLEQIYSDPSQRLVADCTLLDVDTAVVSDRKGSIAILSCA DLLEDNASPECNLTLNCAYYMGEIAMTLRKGSFSYKLPADDLLRGCTVPGSDFDSSHNTI IASTLLGSIVIFTPLSRDEYELLEAVQAKLAVHPLTCPILGNDHNEYRSRENPIGVPKIL DGDILTQFLELTSMQQESVLSSSVGSAKPSSKSKPVSIPINQVVQLLERIHYALN NT seq 4128 nt NT seq  +upstreamnt  +downstreamnt atggcggtttcagaggaggaatgttcgtctgcgaaatcgcgatcttcgtcttcctcttct agttccacatattacttggccaagtgcgttctcagaggcagtgtcgttcttcaggttctt tacggtcacatacgctctccgagctctctcgatgtcgtctttggcaaggagacatccata gagttggtggtaataggcgaagatggggttgtacaatctgtatgtgagcagcctgtattt ggcactatcaaggatatggccatcctaccatggaatgagaggtttcgcccatcgtataca cagatgctgggcaaggatcttcttattgtaatttccgattctggaaagctttcatttctc acattttgcaatgaaatgcacaggtttcttcctgtgacacacattcaactttccaatcct ggaaattcaaggaatcaggtagggagaatgctggcctcagattccagtggctgctttatt gctgctagtgcatatgaaaatcgattggctttattctccacttcagtttctgctggcagt aatattgttgataagagaataacttatcctcctgatggtgaaggagattcagtggttcct cgaagcatgcagaaagccagtatatgtggtgccatatggagtatgtgctttatttcaaaa gaccatggccaccttacaaaggacaacaatgctgttctagcggttcttcttaataggaaa ggagcaattttgaatgaactgcttttattgggatggaatatcagagaacaaactatacat gttctctctcagtttttagaagatggacctctggcatacgaggttgttgaagttcctcaa tcttatggatttgcacttctatttagggttggtgatgctctcttgatggatcttagagac gcttatagcccctgttgtgtctatagaataggcttacactttacacccaatgtggaacaa aattttattgaagagtcatatagagtacaagatgcagatgatgaaggactatttaatgtt gctgcatgtgctctgctggaactaagggattatgatcccatgtgcattgacagcgatgat ggcagtctgaatacaaaccagaatcttgtgtgctcttggagttgggaacctggcaataat agaaaccgtaggatgattttcggcatggatacaggggaactgttcatgatagaaatgaat ttagattccgatggcctgaaagtgaatcagtctgcttgtctttataagggtctaccatac aaggcacttttgtgggttgaaggcggatatttggctgcactagtggaaatgggggatgga atggtcttgaaattagaaaatggaaggctgatatatgcaaatcccatccagaacgttgcc ccaattttggatatgtcagttgttgacaagcatgatgagaaacaagaccagatgtttgca tgctgtggaatggcacctgaggggtctttaagaattattcgaaatgggatcagtgtagaa agtctgttgaggacagctccgatttatcaaggtataacgggtatatggactattaaaatg aaactaaacgatgcttatcattcatatttggtcttatcatttgttgaagagaccagagtt ctatcagttggcttgagttttattgatgtcactgattcagttggtttccagtctgacatc tgtactttggcttgtggtcttttggatgatggtttattggttcaaatacatcaaaatgca gtgaggttatgtttacccaccaaggtcgcccattctgaaggcattgaattatcttctcca gctcgtgcatcttggtttccagataatattggtataagcttgggagcagttggacataat gtgattgttgtttccacttctaacccatgcttcttatttatccttggagttcgaaaggtt tcaggatatgactatgaaatatatgaaaagcaatatttgagattgcagaatgaattgtca tgcatttcaattcctgaaaaacattttaccaaaaaagaatcaaatttttttatgaactca gttgaaaatagcattatgtccacccttctaaatggggtgagtagtgattatattattgta ataggcacccataggccttcagtggagattttgtctttcgttccctctataggcctaagg gtcctggcttcgggaactatttcattgatgaatattttagggaatgctgttagtgggtgc attcctcaagatgtgagacttgttttagttgacgggttttatattcttacgggtctcagg aatggaatgctgcttcgttttgagtggcctcatagtactatgatgaactcatctgatatg cctatgcagagtcctgttattccctttttattaactagtcctgattcttttaacaaggaa ttgcacaacactactattttggagaagcacgaggatgaaattccttctagtcttcaattg attgctattcggcgtatagggatcactcctgtttttctggttccgttgactgattggctg gattccgatataattgttttaagtgataggccgtggttattgcatagtgcaagacacggt ctttcatatacttccatatcatttcaaccgtctacacatgtaactcctgtgtgttctgct gaatgcccaaatggactattatttgttgcggaaagcagtctacatttggtagagatggta catagcaagagacttaatgtgcagaaattccaccttgggggcaccccaaggaaggttcta tatcacagtgagagcaaattattacttgtgatgaggactcaattgattaatgatacatgt tcatctgacatatgttgtgttgatcctcttagtgggtcaattttatcatctttcaagctt gaaatgggagagacaggaaaatccatggagttagtgaggaatggaaacgaacaagtgctt atagttggaacaagcttgtcttctggtcctgccataatgcccagtggtgaagctgaaagt accaagggtcggatgattgtcctctgccttgaacatgtgcaaaactcagataccggttca atgactttttgttcaaaggcaggattatcatctctacaaacctcaccatttcgtgaaatt gttggatatgctacggaacagttatcaagcagtagtctttgtagcagtccagatgatgca agctctgatggtataaaacttgaggaaacagaagcatggcaattacgagtagtttattca actaccttgcctggaatggttcttgccatctgcccttatcttgatcgttatttcttggca tctgctggtaatgctttttatgtatgtggtttcccaagcgatagtttccaaagagtgaaa aggcttgcagttgggaggacacgttttatgataacatctttgacggctcatgttactaga attgccgtcggtgattgtcgtgatggtattcttttcttctcttatcaagaggatgctaaa aagctggagcaaatttattctgatccttcacagaggctagttgctgattgtactcttttg gacgttgacactgctgttgtttcggatcgcaagggaagcattgctatcttatcatgtgct gatcttttagaagataatgcaagcccagaatgcaacttaacgctgaactgtgcgtattac atgggtgaaattgccatgaccttgaggaaaggttcattttcatacaaacttccagctgat gatttgttgagaggttgtactgtccctggctctgactttgattcatcacacaacactatc attgccagtacattattagggagcattgtaatcttcactcctctatcgagggatgagtat gaacttttggaagctgtccaagctaaacttgcagttcatccactaacttgcccaattctg gggaatgatcataatgagtatcgtagtcgtgaaaatccgattggagtaccgaaaatactc gatggtgatatactgactcagttcttggaacttacaagcatgcaacaggaatcggtatta tcgtcatctgttggctctgcaaagccgagctcaaagtcgaagcctgtatccatccccatc aatcaggtcgtgcaactccttgaaagaattcattatgccctcaattag

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